Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0833 |
Symbol | |
ID | 8131758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 972188 |
End bp | 973072 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644864115 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003016421 |
Protein GI | 253687231 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGTTCC GTCACATTCG TTATTTCATC GCGGTCGCCG AGGAATTGCA TTTCACGCGT GCTGCGGTGC GTCTAAATAT CGGTCAACCT CCACTTTCGC AGCAAATCCA ATCGCTTGAA GCAGAATTAG GTGTCTTGTT GTTCGAGCGA ACCCGACGTA GCGTGCGTTT GACAGAGGCC GGTCAGCACT TTCTGATTCG TGCCCGTGAG ATTCTGGAAA GTAGTGAAGG TGTTGCCAGT GAATTACAGC GAATTTCACG CGGAGAAGCA GGGGAGTTAA AAATCAGTTT TACGTCCACA GGCCTGCTGG TAGAGGAGTT AAGAACGCCG CTGAGAACGT TCAGGGCAAA ATACCCTGAA GTGCGACTTA CGCTGAAAGA AATGTTCACT CACCTCCAGT TTGCCGCGCT ATTAGCTGGT GAGTTGGATA TCGGCTGTGT GCGTTTTAAC GGGCCACGTG CACCTGATGG GTTGACGTTG CGCTGGATTC GCAACGACCG TCTGTGCCTT GTCCTGCCTG ACGATCATCC GCTGGCGGGG CGTACCGACG TGGGGATCGT TGAGGTTCGC GATGAGCCTT TTATTGGCTA CCCGGCGAAG GCTGGTGCCA GCGTTTCTGA CTACGTGACG ATGTGCTGTG AACAGGCGGG TTTTATCCCT AATGTTACGC AGGAAGCACG GGAAGCGATG ACTCAAATTG GCCTGGTTGC CGCTGGAATG GGGGTGGCGA TACTGCCGCA GCCGATGGAT CAGTTGCAGC CGAAAGGTGT GTGTTTTATC CCTCTGTCTG ATGCTGGTGC TCAGCTTCGT ATGGCGCTGG TCACACGAGA ATCGGATAAC TCGCCGCGTG TTCGTAATTT TGTGGATCTG GTTCGCCAGA TGTGA
|
Protein sequence | MEFRHIRYFI AVAEELHFTR AAVRLNIGQP PLSQQIQSLE AELGVLLFER TRRSVRLTEA GQHFLIRARE ILESSEGVAS ELQRISRGEA GELKISFTST GLLVEELRTP LRTFRAKYPE VRLTLKEMFT HLQFAALLAG ELDIGCVRFN GPRAPDGLTL RWIRNDRLCL VLPDDHPLAG RTDVGIVEVR DEPFIGYPAK AGASVSDYVT MCCEQAGFIP NVTQEAREAM TQIGLVAAGM GVAILPQPMD QLQPKGVCFI PLSDAGAQLR MALVTRESDN SPRVRNFVDL VRQM
|
| |