| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0813 |
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| Symbol | |
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| ID | 8131738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 949056 |
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| End bp | 950249 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864097 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003016403 |
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| Protein GI | 253687213 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.415676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAACCT GGAAACTTAA CCTCTTCTCT GCCTGGCTGG GATGCTTTTT CACCGGGCTG
GCCATGAGCC AGATATTGCC CTTCCTGCCA CTGTACATTG AGCAGCTTGG CGTTAATTCG
CACGAGTCAC TAAGTCTGTG GTCCGGTTTG ATCTTCAGCT CGTCTTTTCT GATCTCTGCC
ATCGTTGCGC CACTGTGGGG AAGCCTCGCC GACCGTAAAG GCCGCAAGCT CATGCTGCTG
CGCGCCGCAC TCGGTATGGC GATCGTGATG TCGTTGCAAG GACTGGCAAC CAACGTGTGG
CACTTGTTCA TCCTGCGCTC GCTCATGGGG CTGACCTCTG GATACATTCC CAATGCAATG
GCGCTAATCG CCTCCCAGGT TCCGCGTGAA AAAAGCGGCT GGGCGCTGGG CATGTTATCG
ACCGGGCAGA TCGCCGGCGT CATTCTCGGC CCCTTATTCG GCGGCTTTAT GGCCGACTAC
ATCGGGCTAC GCATCGTCTT TTTCATCACC GGCGGCATGC TGTTTACCAG CTTCCTGATT
ACGCTTTTCG CGATTAAAGA AAGCGTGGTT AAAGTCACCA AAGAGAATCG ACTCAGCGGG
AAAGCCGTCT TTGCTTCCCT GCCGTATCCG GCATTGATTA TCTGTCTGTT TATTACGACG
ATGATGATCC AGATGGCGAA CGGCTCCATC AGCCCTATTC TGACGCTGTT CATCCGCGAT
CTGACGCCCG GCACGGACAA CATTGCCTTT ATCAGTGGCG TGATTGCCGC CATTCCCGGT
GTATCCGCTC TGCTATCTGC ACCGCGTCTG GGTCGTTTAG GTGACCGGAT CGGCGCACAC
CGCGTCCTGA TCGCCGCACT GGCGATCAGC GTACTACTGT TCCTCGTCAT GGCAGCGGTA
CAAAGTCCCA CCCAGCTCGG TATCCTGCGC TTTATGTTGG GCTTTGCCGA TGGCGCGCTG
ATGCCAACCG TACAGGCGCT ATTAGTCAAA TACAGTAGCC AGCAGGTAAC AGGCCGAATC
TTCGGCTATA ACCAGTCATT TATGTATCTG GGTAACGTAC TGGGGCCGCT GGTCGGTTCC
GGTGTGTCCG CCATGATGGG ATTCCGCTGG GTTTTCATCG TCACCGCCTT CCTGGTGCTG
TGCAACACGC TACAGCTCTT TTTCGCCTTC AGGAAACCGC ACAGAAAATC ATGA
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| Protein sequence | METWKLNLFS AWLGCFFTGL AMSQILPFLP LYIEQLGVNS HESLSLWSGL IFSSSFLISA
IVAPLWGSLA DRKGRKLMLL RAALGMAIVM SLQGLATNVW HLFILRSLMG LTSGYIPNAM
ALIASQVPRE KSGWALGMLS TGQIAGVILG PLFGGFMADY IGLRIVFFIT GGMLFTSFLI
TLFAIKESVV KVTKENRLSG KAVFASLPYP ALIICLFITT MMIQMANGSI SPILTLFIRD
LTPGTDNIAF ISGVIAAIPG VSALLSAPRL GRLGDRIGAH RVLIAALAIS VLLFLVMAAV
QSPTQLGILR FMLGFADGAL MPTVQALLVK YSSQQVTGRI FGYNQSFMYL GNVLGPLVGS
GVSAMMGFRW VFIVTAFLVL CNTLQLFFAF RKPHRKS
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