| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0798 |
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| Symbol | |
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| ID | 8131723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 930879 |
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| End bp | 931841 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644864082 |
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| Product | cytochrome c nitrite reductase, NrfD subunit |
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| Protein accession | YP_003016388 |
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| Protein GI | 253687198 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | [TIGR03148] cytochrome c nitrite reductase, NrfD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATAACG CCTTCACGTT CGACACGCTG GTATGGGACT GGCCCATCGC CGTTTATCTT
CTTCTGGTCG GTATTTCAGC AGGAATGGTC ACGCTCTCGA TGCTCCTCAG GCGCTACGTT
CCCAGCGAAT ATCACGGTAG TAATCGCTTC ATCAAAACCA CCGCCATCGT GGCACCGCTT
GCTGTCATCC TCGGGCTGGC GATTCTGATT TTTCATCTGA CTCAACCGCT GACCTTCTGG
TACTTGATGG TCTTTTACAA CCCGACGTCC ATCATGTCGC TTGGTGTGAT ACTTTTTCAG
GTGTATTTCG TCGTGATGCT GTTATGGCTC ATCACGCTTT ATCATGACGG CTGGCTGATG
CAACTTGAGG CCGTCTGGCA ACGGCCAGCG CTGGCGGCGA AAGCGCGTAA GGTGGCGGCG
GCGATCGTTA GCAAGGCCGC GCTGATTGAA AACCTGCTGC TGGTGCTGGC CATCCTGCTC
GGCTGCTATA CCGGCTTTCT GCTGTCCGCC CTGAAGTCGT TCCCGCTCTT GAATAACCCC
GTTCTGCCCG TCCTGTTTCT GGTCTCCGGC ACCACCTCCG GCATTGCCGT CATGCTGCTG
GCCAGCGCGT GGGGACGCAC GACCTCGAGT CATTCACACT CCCTGCATTT TCTCCATCGA
GTGGAAACGC CGGTGGTGTA CGCCGAGCTG TTCCTGCTAT TCGCGTTTTT TATCGGGCTG
CTGCTTGGCG GCGGGCAAAA GGTTGTCGCC GCACAGACCG CACTCTCGGG CTTCTGGGGT
GGCATATTCT GGATTGGCAT TATCGGTATC GGCATTGTGA TTCCCGCCAT TGCCAATCGG
GTGCGTAAAC CTTCGGCCCA TTCCGGCAAA GGGCAACTCA TTACGTTAGC CGCCATGAGC
CTGTTCGGCG TGTTCCTGCT GCGACTGTTC GTGCTTTATG CCGGACAAAT GACGGTGGCC
TGA
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| Protein sequence | MHNAFTFDTL VWDWPIAVYL LLVGISAGMV TLSMLLRRYV PSEYHGSNRF IKTTAIVAPL
AVILGLAILI FHLTQPLTFW YLMVFYNPTS IMSLGVILFQ VYFVVMLLWL ITLYHDGWLM
QLEAVWQRPA LAAKARKVAA AIVSKAALIE NLLLVLAILL GCYTGFLLSA LKSFPLLNNP
VLPVLFLVSG TTSGIAVMLL ASAWGRTTSS HSHSLHFLHR VETPVVYAEL FLLFAFFIGL
LLGGGQKVVA AQTALSGFWG GIFWIGIIGI GIVIPAIANR VRKPSAHSGK GQLITLAAMS
LFGVFLLRLF VLYAGQMTVA
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