Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0750 |
Symbol | |
ID | 8131675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 874049 |
End bp | 875767 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644864034 |
Product | Protein-N(pi)-phosphohistidine--sugar phosphotransferase |
Protein accession | YP_003016340 |
Protein GI | 253687150 |
COG category | [S] Function unknown |
COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCGAT ATTTGGAAAT TATCAGAGGC GGTAAAGGCT GGGGCGGGCC GCTGCTCGTT AATGTCACAC CAGGGAAAAA AATTGCTTAC ATCACCGGAG GGATTCGTCC CACCGTGGTA GACCGGCTGG CGGAGCTTAC CGGCTGGGAA GCCGTGGATG TCTTCAAACA TGGAGAACCC GCAGAACAGG AGATCGGTTT AGTGGTCATC GACTGCGGCG GCACGCTGCG CTGCGGTCTG TATCCGAAAC GGGGGATCCC GACGATCAAT CTTCACCCGA CCGCGAAAAC CGGCCCGCTG GCGGAATACA TTCGGGAAGA GATCTACGTT TCCGATGTTA CGCCTGCGGG TATTCGGCTG CGGACGGAAG GGAAGCAAGG AGACAAACTG GGCATTGTGG CTGACGACCT CACGGGCGCG ACCACGATCG GCGTTCTGCT GGCACGCAGC GGCATGAAAA CTGCCGCTTT TTTTAACACC GCCTCGTTCA GCGATTGTGA GTCAGACTGG CAAGCGATGG TGATCAGCAG CGATAGCCGC CCCCTGCCCA AAGCCGAAGC GAAAAACCGG GTGAGAAATG CGACCCAGGC GCTGCTGGAG CGCGGCGCGG TGTATTTCAC CAAGCGGGTT GATACCACGT TGCGCGGTGG GATTGGCTAC GAAATTGATG CCATGCTGGA GGTCTTGCCG CAGGAAACCA TCGCGGTGGT GGTGCCAGCC ATGCCACAGT CGCGCCGTAT TGTGGTGGGC GGTTACTCGG TGATTGACTC CGTCGCCCTC TCCTGCACCG ATGTCGCGAA AGACGTTCGT ACACCAGTGA CGGAAACCTT TGTTCCTGGG TTGCTTAGCG AGCAAACGCA TCATCAGGTG AAACATATTC CCCTGTCTTG CGTGTTAAAA GGCTATCACG CCATCAGCGA TGCGCTGGTT CAGCAGCAGC GGGAAGGCGC GCGTGTCATA GTCGTGGATG CCATTTCACT GGCCGATGTG GAAAATATCG CTCGCGCAGT CACCAAGCTG AACTGGAATG TGCTGGCCGT TGATCCCGGC CCTTTCACCG AGCGTTTGGC CTTTACTCGT GAAATGATCC GCGATGAGGA ACGTAAAGAG AAAGCGCTCA TCCCGCAGGA GCAACAGCAG GGTTCGATTA TCGTCGTCGC AGGCAGCGCA ACGCCAGTAA CCAAGAAGCA GCTTACGGCA CTCATTGAAA CCGACCCACG CGTTTGCCAC ATTCCCATTG ATGCCGAACT TCTGATTGAT AAAGAGCACT CGGCGGATAT AGAAGTGGCG AGGGTCGTCA GGCAGGCACT GGAGTGTGTG AAAAACCACG CCAACGCCAT CTTCGTCTTT GAATCCGCAT TAACGGGTCG CCTGCTCGAT CTCAGCGTGG AAGAACAGCG TTTTGGATTG GCGCACGGTC AGGCAGCGGA AAATATCAAT CAGGGTTTGG GAAATATCGT CAAAACGGTG CTTGAGGCCG CCGCCTCAGA GATTAAAGGA CTGTACATGA CGGGTGGAGA CACCATGGTC AACGTACTCA AACAGCTCGG CGCTAACGGT ATTGAAATGG TGGATTACGT AATTCCTCAA ACCGATCTGG TCAAGATTAT TGGCGGTGAC TATGAGGGGT TAATTTGTGT CGGAAAAGGC GGATTAACCG GACCTGAAGA TATTATCCAC ACCATTATTC ATCATATTCA CCGGGAAACG CTGCAATAA
|
Protein sequence | MTRYLEIIRG GKGWGGPLLV NVTPGKKIAY ITGGIRPTVV DRLAELTGWE AVDVFKHGEP AEQEIGLVVI DCGGTLRCGL YPKRGIPTIN LHPTAKTGPL AEYIREEIYV SDVTPAGIRL RTEGKQGDKL GIVADDLTGA TTIGVLLARS GMKTAAFFNT ASFSDCESDW QAMVISSDSR PLPKAEAKNR VRNATQALLE RGAVYFTKRV DTTLRGGIGY EIDAMLEVLP QETIAVVVPA MPQSRRIVVG GYSVIDSVAL SCTDVAKDVR TPVTETFVPG LLSEQTHHQV KHIPLSCVLK GYHAISDALV QQQREGARVI VVDAISLADV ENIARAVTKL NWNVLAVDPG PFTERLAFTR EMIRDEERKE KALIPQEQQQ GSIIVVAGSA TPVTKKQLTA LIETDPRVCH IPIDAELLID KEHSADIEVA RVVRQALECV KNHANAIFVF ESALTGRLLD LSVEEQRFGL AHGQAAENIN QGLGNIVKTV LEAAASEIKG LYMTGGDTMV NVLKQLGANG IEMVDYVIPQ TDLVKIIGGD YEGLICVGKG GLTGPEDIIH TIIHHIHRET LQ
|
| |