| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0627 |
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| Symbol | |
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| ID | 8131550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 729603 |
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| End bp | 730475 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644863911 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003016218 |
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| Protein GI | 253687028 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTGCAA AATTTTTTCC CTATCTTGTG CTGTTGCCGA CGCTGGTTTT TTTGCTTGCC
TTTACCTATT TCCCCCTGCT GCGTTCGGTC ATCGACAGCC TGTATGACAC CCGGCTGAAT
GCCGATGCGC CGCTGTTCGT CGGGATGGAT AATTTTGTGC GTTTGGTGCA GGACGCGGTG
TTCTGGCAGG CCTTGCTGAA CAACGTGCTT TATATCCTGA TGACGGTGGT ACCCGGCGTG
CTGCTGGCGC TGTTGCTGGC GGTACTGCTG TGGGAAAACA CGCGTGTTAA CCGCTGGCTG
CGTACCGCTT TCTTCTTTCC GATGATTATT CCGCTGGTGA GTGCCGCGAC GCTGTGGCTG
TTCATCTTTA TGCCGGGGTT GGGGCTGCTG GATTACTATC TGGCGAAAGT GTTCGGCCCG
ATGAATAACA ACTACCTCGG CATGAGCGAC AGCGCGTTGG TGGCGGTAAG CGTCATCGGT
ATCTGGAAAT TCGCCGGTTA CTACATGCTG TTTTTTCTCG CCGGTCTGCA AGCCGTGTCG
GCTTCCGCAC GCGAGGCGGC GCTGATGGAA GGGGCTTCAC GGCGTCAGGT GTTTTTTTAT
GTCACGCTGC CGCTATTGCG GCCAACCATC GCTTTCGTCG TCACCATCGC TTTTATCTAC
GCCATTACCC AGATCGACCA TGTTGCCGTG ATGACACGCG GCGGGCCGAA TAACGCCACA
ACCGTGCTGC TCTATTACAT CCAGGATCTG GCGAATGATA CGCACGATCT GGGCAAAGCC
TCTGCGGCTA CCTTCCTGAC GCTGGCGATG CTGTTCGCCT TTTCCATTAT GAATCTGAAA
GTGCTGGAGA AGGGGGCACA CTATGAGCGC TGA
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| Protein sequence | MRAKFFPYLV LLPTLVFLLA FTYFPLLRSV IDSLYDTRLN ADAPLFVGMD NFVRLVQDAV
FWQALLNNVL YILMTVVPGV LLALLLAVLL WENTRVNRWL RTAFFFPMII PLVSAATLWL
FIFMPGLGLL DYYLAKVFGP MNNNYLGMSD SALVAVSVIG IWKFAGYYML FFLAGLQAVS
ASAREAALME GASRRQVFFY VTLPLLRPTI AFVVTIAFIY AITQIDHVAV MTRGGPNNAT
TVLLYYIQDL ANDTHDLGKA SAATFLTLAM LFAFSIMNLK VLEKGAHYER
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