Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0621 |
Symbol | |
ID | 8131544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 721840 |
End bp | 722991 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644863905 |
Product | L-1,2-propanediol oxidoreductase |
Protein accession | YP_003016212 |
Protein GI | 253687022 |
COG category | [C] Energy production and conversion |
COG ID | [COG1454] Alcohol dehydrogenase, class IV |
TIGRFAM ID | [TIGR02638] lactaldehyde reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.529612 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAACA GAATGATTCT TAACGAAACA TCCTACTTTG GCACAGGCGC TATCGCCCAT ATCGTCGATG AAGTAAAACG ACGAGGATTC AGGAAAGCAC TGCTGGTGAC GGACAAGGAT TTGGTTAAAT TTGGCGTCGC GGCCAAGGTC ACTGAGAAGC TGGATGCGGC AGGGTTACCC TACGATATTT ACGATGAGGT GATTCCCAAT CCAACCATCA GCGTGGTGGA AAAAGGCATT GAACGATTCA AAGCATCACA GGCTGATTAC CTGATTGCGA TTGGCGGCGG CTCACCGCAG GATACCTGTA AGGCTATCGG GATTATTATC AATAACCCTG AATTTGCCGA TGTCCGCAGC CTCGAAGGCG TTGCGGCTAC CCGACGCCCC GCAGTCCCGA TTATCGCGAT CCCGACCACC TCAGGTACTG CCGCAGAAGT CACCATCAAC TACGTCATCA CGGATGAAGA AAAACGCCGC AAATTCGTGT GCGTCGATCC GCATGATATT CCGATTGTCG CTATCGTCGA TCCCGACATG ATGGCGAGCA TGCCAGCCTC ACTGAAAGCT GCCACGGGGA TCGACGCCCT GACGCACGCC ATTGAAGGCT TTACGACCAA AGCCGCCTGG GAGCTAACCG ATACGCTGCA CCTGAAGGCC ATTGAAATTA TCAGCCGCTC GCTGCGTGAT TCCGTCGCAG GGAAACCAAA AGGCGTGGAA GAGATGGCGC TGGGGCAATA TATCGCCGGT ATGGGATTTT CAAACGTTGG GCTTGGTCTG GTACACGGCA TGGCGCATCC ACTCGGCGCG TTTTACAACA CCCCACACGG CGTAGCGAAT GCCATCCTGC TGCCGCATAT CATGGCCTAC AACGCGGATT ATACCGGTGA AAAATTCCGG AACATCGCCA TTGCGATGGG GGTAAAAAAC GCGGCAGCAA TGCCGATTGC CCAAGCGCGA GAAGCTGCCA TTAACGCCGT TCGGCAACTT TCTCACGATG TGGATATTCC GCCGAGACTG CGCGATGTCG GCGTGAGAGA AGAAGATATT CCGGCACTGG CACAGGCCGC CTTTGACGAT GTCTGCACCG GCGGCAATCC GCGCGATACG AATATCGACG AGATTAACGC GCTGTATCGG TCTATTTATT GA
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Protein sequence | MANRMILNET SYFGTGAIAH IVDEVKRRGF RKALLVTDKD LVKFGVAAKV TEKLDAAGLP YDIYDEVIPN PTISVVEKGI ERFKASQADY LIAIGGGSPQ DTCKAIGIII NNPEFADVRS LEGVAATRRP AVPIIAIPTT SGTAAEVTIN YVITDEEKRR KFVCVDPHDI PIVAIVDPDM MASMPASLKA ATGIDALTHA IEGFTTKAAW ELTDTLHLKA IEIISRSLRD SVAGKPKGVE EMALGQYIAG MGFSNVGLGL VHGMAHPLGA FYNTPHGVAN AILLPHIMAY NADYTGEKFR NIAIAMGVKN AAAMPIAQAR EAAINAVRQL SHDVDIPPRL RDVGVREEDI PALAQAAFDD VCTGGNPRDT NIDEINALYR SIY
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