| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0620 |
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| Symbol | |
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| ID | 8131543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 720332 |
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| End bp | 721795 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644863904 |
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| Product | hypothetical protein |
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| Protein accession | YP_003016211 |
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| Protein GI | 253687021 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.391687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAAAT CTGTACGGCG ACTCATCAGA CGCGGTCTTA TCGTCATCGG TGTTATTGCA
ATGACGCTGT TGGCTATTCG TATTTATGAC ACGCAAAGTG GGCCGCCGCT GGCGCCGTGG
CACACCTACG TACCGGATGA GCTGTCAACG GATGAGCTGG ATAAGAGCGA CTGGGCTGCG
TATTTAAAGC AGGAAACACT TATCTTTCTG CAGGTGAATC AGCATGTCAC GCAGGAACTG
GATGAGGATG AACAGCGTCC GGTTAACCGC TATTTTTCGG GTAGCCCGGT TTACCCTGGG
AAATTCCAGC ATGACTGGAA CCGATCCTAT GAACTGTCGC CGGAAGGGGA ACTGAAAGGC
GCGGTGGTGA TGCTGCACGG CCTGACCGAT TCACCTTATA GTTTGCGGCA TATCGCGGAA
CGCTATCGTC AGCGTGGTTT TTTCGTTGTT GGCATTCGTT TGCCTGCGCA CGGGACGGTG
CCGGGGGCGC TGACCGATGT GCAATGGGAA GATTGGCTGG CAGCCACGCG TCTGGCAGTG
CGTGAGGCGA CGTCGCACCT GACGTTACAA CAGGGCCAAA GGTTGCCGCT GCATATCGTC
GGTTTTTCCA ACGGCGGGGC GCTGGCGTTG AAGTACACGC TGGATACGTT AGATAATCCT
GCGCTGGCGC GTCCCGATCA GCTTATCCTT ATTTCCCCGA TGATCGGTAT TACCAGCTAT
GCGCGTTTTG CGGGGCTGGC TGGGCTACCC GCTATCTTTC CGGCCTTTGC CAAGTCTGCC
TGGTTGGGCA TCTTGCCGGA ATTTAATCCC TTCAAGTACA ACTCATTTCC GGTAAATGGT
GCGCGCCAAT CGTGGTTGTT AACCCATGAG CTTCAGAGTC AGTTAAGCCG TAAAGCGCAA
GCGAATGCGT TGGTTGATTT ACCGCCAGTG CTGACGTTCC AATCGGTGAT GGATTTCACC
GTTAGCACGC GTGCGGTCAT TACGGCGTTT TATAACCTGC TGCCGGCTAA CGGGAGCCAG
TTGGTTCTCT TTGATGTCAA TCGTACCGTC AATTTTGGCC CGCTTCTGCG TGAATCGACG
AATGGTGCCG TCAGCCAGCT ATTACCCGCC ACCCCACGCC ATTATGATAC GACGGTGATT
TCTAACGCTG CGCCGAACAG TTCTCATGCC GTGGCGTTCG ATGTTGTTGC TGGGGCGGTG
CAGGAACAGA CCCGCGAGCT GGGGATGGAC TATCCATCGG ATGTGTATTC GCTATCGCAC
GTATCACTGC CGTTCCCAGA TTCGGATTCG CTGTATGGTC GTTTCTCACA GAACCCTACC
GAATTTGGTC TGCCGCTGGG GAAAATTACC CCAAGAGGAG AACGTTCCGC GCTGGTTGTC
GATCTGGATA CGCTGCTGCG GCTGTCCTCT AACCCGTTTT ATCCCTACTT GATTCAGCGT
ATTGAAGAGA AGATTCCGCA ATAG
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| Protein sequence | MLKSVRRLIR RGLIVIGVIA MTLLAIRIYD TQSGPPLAPW HTYVPDELST DELDKSDWAA
YLKQETLIFL QVNQHVTQEL DEDEQRPVNR YFSGSPVYPG KFQHDWNRSY ELSPEGELKG
AVVMLHGLTD SPYSLRHIAE RYRQRGFFVV GIRLPAHGTV PGALTDVQWE DWLAATRLAV
REATSHLTLQ QGQRLPLHIV GFSNGGALAL KYTLDTLDNP ALARPDQLIL ISPMIGITSY
ARFAGLAGLP AIFPAFAKSA WLGILPEFNP FKYNSFPVNG ARQSWLLTHE LQSQLSRKAQ
ANALVDLPPV LTFQSVMDFT VSTRAVITAF YNLLPANGSQ LVLFDVNRTV NFGPLLREST
NGAVSQLLPA TPRHYDTTVI SNAAPNSSHA VAFDVVAGAV QEQTRELGMD YPSDVYSLSH
VSLPFPDSDS LYGRFSQNPT EFGLPLGKIT PRGERSALVV DLDTLLRLSS NPFYPYLIQR
IEEKIPQ
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