| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0592 |
|---|
| Symbol | |
|---|
| ID | 8131512 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 691528 |
|---|
| End bp | 692535 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 644863873 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003016183 |
|---|
| Protein GI | 253686993 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACAC CTTCTCAAGC TGCTGTGTTT TCCGTCCTCG ATCTTGCGCC TATTCCGCAG
GGTGCGACAG CACGTGACGC CTTCCATCGC TCGCTGGATC TGGCGCAACA TACAGAAAAA
TGGGGCTATC ACCGCTATTG GCTGGCGGAA CACCACAGCA TGACCGGTAT CGCCAGCGCA
GCAACCTCAG TGCTGCTCGG CTACCTTGCC TCGGGAACGG CGCGCATTCG TCTCGGCTCC
GGCGGCGTGA TGCTGCCGAA CCACTCACCG CTCGTCATTG CAGAGCAATT TGGTACGCTG
GAATCGCTGT ATCCCGGCCG CATCGATTTG GGATTAGGCC GCGCACCCGG CACCGACCAG
CGCACCATGA TGGCACTGCG CCGTCACCTC AATGCCGATA TTGAAGATTT CCCACGCGAT
GTGCAGGAAC TGCAACGCTA TTTCGCCGAT GCACAGCCGG GTCAACCGGT GCAAGCCGTT
CCGGGACAAG GTTTACACGT TCCGATCTGG CTATTGGGAT CGAGCCTGTA CAGCGCGCAG
TTGGCCGCGA GACTGGGCCT GCCTTTTGCC TTCGCCGCCC ATTTCGCGCC CGATATGTTG
TTGGAAGCGT TCCGTCTCTA TCGCGAGCAC TTTATCCCTT CAGCCACCCA CACCAAACCT
TACGCGATGG TTTGCGTCAA TGTAGTCGCG GCAGAGAGCG ATCGGGATGC ACGCTTCCTC
TTTACTTCGA TGCAGCAACA GTTCATCAAC CTGCGCCGTG GTACGCCGGG CCCGCTCCCC
GCACCGGTAG AAAACATCGA CACGGTCGGA TCACCTGCCG AGCAGTTTGG CGCGGATCAA
GCATTACGGC TGTCCATTGT TGGCGATCGC GCTAAGGTGC GTCATGGATT GCAGAGTCTG
TTGCGAGAAA CGCAGGCGGA CGAAGTGATG ATCAATGGCC AAATATTTGA CCATCAGGCA
CGCCTGCAAT CTTTTGAAAT TGCTATGGAT GTGCGGCAAA CGCTTTAA
|
|---|
| Protein sequence | MSTPSQAAVF SVLDLAPIPQ GATARDAFHR SLDLAQHTEK WGYHRYWLAE HHSMTGIASA
ATSVLLGYLA SGTARIRLGS GGVMLPNHSP LVIAEQFGTL ESLYPGRIDL GLGRAPGTDQ
RTMMALRRHL NADIEDFPRD VQELQRYFAD AQPGQPVQAV PGQGLHVPIW LLGSSLYSAQ
LAARLGLPFA FAAHFAPDML LEAFRLYREH FIPSATHTKP YAMVCVNVVA AESDRDARFL
FTSMQQQFIN LRRGTPGPLP APVENIDTVG SPAEQFGADQ ALRLSIVGDR AKVRHGLQSL
LRETQADEVM INGQIFDHQA RLQSFEIAMD VRQTL
|
|---|
| |