Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0547 |
Symbol | |
ID | 8131465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 635766 |
End bp | 636269 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644863826 |
Product | G/U mismatch-specific DNA glycosylase |
Protein accession | YP_003016138 |
Protein GI | 253686948 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3663] G:T/U mismatch-specific DNA glycosylase |
TIGRFAM ID | [TIGR00584] mismatch-specific thymine-DNA glycosylate (mug) |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0527787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACCG ATATTCTGGC CATGAATCTT CAAGTAGTTT TCTGCGGCAT TAACCCTGGG CTGTCGACGG CCCATCACGG TTACCACTTC GCGAACCCCA GTAATCGCTT CTGGAAAGTG ATTCATCATG TAGGTTTTAC CGAACGTTTG CTAACACCCG CGGAAGAACA GCATCTGCTG GATACCGGAT GCGGTATCAC CATGCTGGTG GAGCGCCCAA CGGTTGAAGC TACCGAACTG GGGCGAGACG AGCTGCTGCA AGGCGGCAAT GCGATTGTTG AGAAGATGGA ACGCTATCAA CCGCGTGCGC TGGCCGTGCT GGGGAAGCAG GCGTTCAGTC AGGCGTTTGG TATCAAAAAG GTCTCATGGG GGCGTCAGTC GCTGAATATT GGCGAAACAC AGGTGTGGGT GCTGCCGAAC CCAAGCGGGT TGAATCGTGC GACGCTGGAG TCGCTGGTGG CGTCCTATCA GGAACTGCAT CAGGCGTTGC AGGATAAGGC GTAA
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Protein sequence | MITDILAMNL QVVFCGINPG LSTAHHGYHF ANPSNRFWKV IHHVGFTERL LTPAEEQHLL DTGCGITMLV ERPTVEATEL GRDELLQGGN AIVEKMERYQ PRALAVLGKQ AFSQAFGIKK VSWGRQSLNI GETQVWVLPN PSGLNRATLE SLVASYQELH QALQDKA
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