| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0541 |
|---|
| Symbol | |
|---|
| ID | 8131458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | + |
|---|
| Start bp | 625822 |
|---|
| End bp | 626184 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 644863819 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003016132 |
|---|
| Protein GI | 253686942 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3544] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAG TCCATTTGTT ATTAACGGCG GCCTTGCTGG TTCCGTTTCT CTCGTTTGCC
GCTGACAGCG CGCATAGCGG CCATGGTTCA GCGAGTGAGT CGTCGTCCTC CCAACAGGCG
TATATGAAAG GGATGGATGC GATGCATACC GAGATGATGG AAGGGTTGAA GTCCAGCGAC
CCTGATATTG CCTTTGCCAA AGGGATGATT GCGCATCACC GCGGCGCGAT TGATATGGCG
AAGACGGAAC TGCAATACGG TAAAGACCCA GAATTGCGCA AGCTGGCAGA AGAGATTATT
AAAGCCCAGC AGCCGGAGAT CGACCAAATG GAAGCCTGGC TGAAGAAGCA GGGCAAGCAG
TAA
|
|---|
| Protein sequence | MKKVHLLLTA ALLVPFLSFA ADSAHSGHGS ASESSSSQQA YMKGMDAMHT EMMEGLKSSD
PDIAFAKGMI AHHRGAIDMA KTELQYGKDP ELRKLAEEII KAQQPEIDQM EAWLKKQGKQ
|
|---|
| |