Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0461 |
Symbol | |
ID | 8131377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 525327 |
End bp | 526589 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644863739 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003016053 |
Protein GI | 253686863 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGAAA GCATGTACAG CCAGCACACC CGACCTGTTG TGCATTTGGC GCTGCTCATC AACATGCTTT CTCTCGGCAG CCTGATGATG GTGATGCCGT TAGGCCCCGA TTTCATCAGC GCGCTTTCCA TGGATGCCAA GAACATCGGC TACATTAGCG GTGGCGCAAC GTTTGCCTCC GCCATCGTCG GCTTCCTCGC CGCTCCCTAT CTGGACAGAT TTAACCGCAA ACATGCTCTG CTCGTTCTGC TGACGCTGCG CTTCGGCCTG ACGGCGGCCT GCATGTTTGC CACCAGCCAA ACCCATCTTT TAGTGCTGTT TATTCTGGCG GGCTGCGTGG CCGGGCCGGC CTCTGGCGTG TTGATGGCGG CGGTTGTCGA TATTGTGCCG GCCAACGAGC GCGGAAAGCA GTTGGCCTAC GTCGGTATGA GTTTTTCGCT CGCGGCCATT ATCATCATGC CACTGTCGCT GGAGTTGGCT CACCGTATTA ACTGGCAAGC GCCGTTTTAT ATTTTCGGCC TCGGCGGCCT GCTGCTGGCG CTGTTAGTGC TGTGGCTCTT TCCTTCCATG CCGCCGACGC ACCGGGCCCA GCAAAGCGCT TCTCCCAGCA CATCCCCCAC TTCCGTATTA CACGACCTGC TGGCCTCCCC TCTTTTCCTG TTGGGGCTGA CAGTGGTTTC GCTACAGATG TTCGGCCATT TCCTGCTGAT TCCCCATTTT TCCAACTACT TTCAGTTCAA TCTGGCTTTC CCACGGGATG ATATTTCCCT GCTTTATCTT TGCGGCGGGC TGGGAAGCAT GGTGACCATG CAGCTGTGCG GCAACCTGCT GGATCGAGGC TATGCCAGCC GGACGATCGT GGTGACAACG CTGCTGCTAG CCGTTGTCAT CCTCTGCGGT TTCGTTTTGC CCTTTTCGCT TTCCCTGTAT CTGGTGTTCA CCCTGTTCAT GGCGCTCAGC GCAGCGCGCT CCAGCAGCAC ACTGGCGATT ACCGCAGGTA TTCCGCTGCC ACATCAGCGC GCCGCGTTTA TGTCCTATCA GGGAACTGCA GCCAATGTGG CATCGGGGCT CGCCAGCGTG GCCTCTGCCG CGTATCTGAG CACCTCGGTT GAGGGAAGAA TTGACGGGTT CTCACAGCTT GCCGTCGCCA GCACCATCTT TGCGCTGGCC GCCATGCTGC TGACCCTGCG CCTGATTCCA CTGCTGGCTG AACGCAGCCG GAAGATGGCA GCACGCCAAC CTGTGCAAGC GACGGGGCAA TAA
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Protein sequence | MDESMYSQHT RPVVHLALLI NMLSLGSLMM VMPLGPDFIS ALSMDAKNIG YISGGATFAS AIVGFLAAPY LDRFNRKHAL LVLLTLRFGL TAACMFATSQ THLLVLFILA GCVAGPASGV LMAAVVDIVP ANERGKQLAY VGMSFSLAAI IIMPLSLELA HRINWQAPFY IFGLGGLLLA LLVLWLFPSM PPTHRAQQSA SPSTSPTSVL HDLLASPLFL LGLTVVSLQM FGHFLLIPHF SNYFQFNLAF PRDDISLLYL CGGLGSMVTM QLCGNLLDRG YASRTIVVTT LLLAVVILCG FVLPFSLSLY LVFTLFMALS AARSSSTLAI TAGIPLPHQR AAFMSYQGTA ANVASGLASV ASAAYLSTSV EGRIDGFSQL AVASTIFALA AMLLTLRLIP LLAERSRKMA ARQPVQATGQ
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