Gene PC1_0414 details

Gene Information

• Locus tag: PC1_0414
• ID: 8131329
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: -
• Start bp: 472235
• End bp: 474889
• Gene Length: 2655 bp
• Protein Length: 884 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 644863692
• Product: hypothetical protein
• Protein accession: YP_003016006
• Protein GI: 253686816

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATACCAG CACGACTAAG GAAAGCCTTA CTGCTCACTC TGGCGTTAGC CTCAGCGACC 
ACCTTCAACG CAGTAAGCAC CATAGCAAAC TCAGCCTCAG CAGCAAATGT CGAGGCGACA 
GGCCTCGTTG ATAGCATTAC CTTTGGCGAT AAAACGTCAG AAAGCGGCCA CGACCTCAAT 
GCAAACAACA GCCAGACTAT TGCGGGAGCA CTGGGCGAAT CGTCACGTAA ATTACTGCCG 
TTTCAGCAAC CCGGTGTCAA TGGCGGTAGC CTGACATTTA CCATGCAGAT CGATCCGCTG 
CGTCGCAATT ATGTTTCCGT CAAACTGTGG GGGGAAGATG ACGGTAACAT TAATACGGGT 
CGCCTCTACC TTTATATGAT CAAAGACGGC GTCGAGTACC AGATCGGTTA CCGTCACGAA 
GGCGACTATT CGCCGCTCAG CGTCGCTCAC TGGAATAAGC CGCTACCGGG ACGCTTTTTC 
TACTCCACCA CACTGCTACC TTATTCCATG ACCAAAGGCA GCACATCCAT CACCTTGAAA 
ATCGTTTCAA CGGGACGACT CTATCCATTC GGATCAGGAG GCCCGGAATC AACCAAGCCT 
TATCAGTATG CGATGAACCA GCCAAGCCGG GGCATTTATC GCGCTTACAC GCATATCGAC 
CCTTTCCTTA ACGTAGCAGG GGAAAAACAG GGCAGTGAGC CTGCCGCAAC GACCCGCCCT 
TCGCCGGGTG ATGAAATCCT CGGCACAAAC GGTCGGTTTC GCACTGCGAT GAATAATCAC 
ATCCAAACGC TTATCAGCAA GCCCTCGACA ACCGATGCGC TGTCTGGCGG GGATTTACGC 
TATCTGGCAC GCGCCTGGTC CGTTCCCGAA TTAGTCAGCT ATCAAAACTC AGGTCTGGTG 
GATAAGGTCG TTGCAACGCT TGATGCTTAC GCGGCGCAGT ACTACGCCGA TACCAACATT 
GCGACAAAGA ACTGGGGCGG CAATTTTGGC TCTCAGGGTC AGGCTATCTA TTACCTTCGG 
AATGCGTTGA CGGCCTCACG CCTTGATGAG TCAGTAAACT ATGGCAACGC GGGAGTTAAA 
AAACGCCGCG TTGCCTGGGC TGATATGCTG TTCGCCAGCC GCGAATTTGG CCGCCAGAAA 
AATCGTCTGG TCTTGAGTAA CCAATCACTC ATCGCTAATA CCAATATTTA TTTCACTAAC 
AAAGGGTTGC TGGTGTTGAG CGATTCGCGC GCCTTCCCTG AAACCACGGC TCAGCGTTAT 
ATCAAAGAAG CCGTCGGCCT GTTGCCCTGG ACGGGGGATG ATCGTAACGG ACCGGGAGAC 
GGTGGCTGGG CGCCATTCGG CGATCGTTAT TATCAGGTTA CCGACAAAGG TCAGACTCGC 
GAGTGGGGCT ATCTCGGGGC AGGCTACGGT GAAGTCCAGT CCTACCTCGC CGAATATTAT 
CGCGTGACGG GCAATGAGGA TTTTCGCAAG CAGATGATAA AAATGGCCAA AGCGCGTGCG 
CCATTCCGTC GTCCCGCGAT CGAAATCAGT AATGGTGCCA ACTACCGTGC AATGGAAGCG 
ATTGGCCTGT TAGCCTGGCG TGGTGCGCAC GAAAGCGACG GTAATTTCGC GGGTTTCCTT 
ACTTACGTCG ATGCGGTAAA TACCAATGAA CGCGCCAAAG GACTTCGCGT CGCCGCTGCC 
AGTAAGGATG CCACGCTGAT TGGCTATGCC AAACAGATGC TTGAGGACAA TCAGTTCTTT 
GCCAACCTCG ACGGCGCAGA GTCTGCATTT GAAGCGCTGG ATGTTTTTGC CGATTACCAG 
ACGATCAAAA CCGCAAGCGA CAGCGGCGCA CGACTGCCGA TGAGCGCAGA CCAGCCGGAT 
TTCGCCTGGG CGGATGAAGA AAACGCTATC GTGGCGGTCA AAAAGGGCAA TGAGCGTCTG 
TGGCTGAGCA CTTATTGGCA GGCCAAAGCA GGAACGGGTA TCAACGGTCT GGCGCGTTTC 
CATTTCAGCA CGCCGAGCTA TGATCAGTAC GGTGTACTGG AAACGACCCC AATTTTCCGT 
TCAACGACGA GCTATACACG GCCTAACCGC ATCGACATGC CGGAGAAAAC ACCGTATACG 
CCACCGAACC CACCGACTAA TGCCTATGCG GGGGAAGTGC TGCCACTGGG TATTAAACCG 
GAGGATGCAT CCAACGATGA ACCTTTCCGG GGTAAGGCCG ATTTCTATGC TACGCGATTC 
GGTCACTATC TGATCGGTAT CAATGCCAAC GCCAGCAATC GCTACGTGTT GAAAACACCG 
GTAGGCTTTA AGAACGCGGA AGATCTGGTA TCACAGCGCA CACTCTCAGG TAACATCACC 
GTCGATCCAC GTTCTACCGC CGTGCTCTAC CTGAATGACA CCCGTGACAC CAAAGCGGTG 
CCCAACGCGC CATTGCATCT GGGATCGCAA AATAGCAATG GTATAAACAC GCTATTCTGG 
ACACAGTCAT CCGGTAGCGA GCACTATAAA GTCATGCGCT CTACCAGTGA AAACGGTACT 
TATCAGGCTA TCGCAACCGT AACGGAAAAT AGCTACAGCG ATCGTACTGG CACGGCATCT 
GGTCGTTACT ACTACCGGAT CGTGGCCACT AACGGTAATG GAGAAAGCTA CCCTTCCATG 
GCAAGTCAGC CCTAA 

 

Protein sequence

MIPARLRKAL LLTLALASAT TFNAVSTIAN SASAANVEAT GLVDSITFGD KTSESGHDLN 
ANNSQTIAGA LGESSRKLLP FQQPGVNGGS LTFTMQIDPL RRNYVSVKLW GEDDGNINTG 
RLYLYMIKDG VEYQIGYRHE GDYSPLSVAH WNKPLPGRFF YSTTLLPYSM TKGSTSITLK 
IVSTGRLYPF GSGGPESTKP YQYAMNQPSR GIYRAYTHID PFLNVAGEKQ GSEPAATTRP 
SPGDEILGTN GRFRTAMNNH IQTLISKPST TDALSGGDLR YLARAWSVPE LVSYQNSGLV 
DKVVATLDAY AAQYYADTNI ATKNWGGNFG SQGQAIYYLR NALTASRLDE SVNYGNAGVK 
KRRVAWADML FASREFGRQK NRLVLSNQSL IANTNIYFTN KGLLVLSDSR AFPETTAQRY 
IKEAVGLLPW TGDDRNGPGD GGWAPFGDRY YQVTDKGQTR EWGYLGAGYG EVQSYLAEYY 
RVTGNEDFRK QMIKMAKARA PFRRPAIEIS NGANYRAMEA IGLLAWRGAH ESDGNFAGFL 
TYVDAVNTNE RAKGLRVAAA SKDATLIGYA KQMLEDNQFF ANLDGAESAF EALDVFADYQ 
TIKTASDSGA RLPMSADQPD FAWADEENAI VAVKKGNERL WLSTYWQAKA GTGINGLARF 
HFSTPSYDQY GVLETTPIFR STTSYTRPNR IDMPEKTPYT PPNPPTNAYA GEVLPLGIKP 
EDASNDEPFR GKADFYATRF GHYLIGINAN ASNRYVLKTP VGFKNAEDLV SQRTLSGNIT 
VDPRSTAVLY LNDTRDTKAV PNAPLHLGSQ NSNGINTLFW TQSSGSEHYK VMRSTSENGT 
YQAIATVTEN SYSDRTGTAS GRYYYRIVAT NGNGESYPSM ASQP