11 homologs were found in PanDaTox collection
for query gene PC1_0414 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_0414  hypothetical protein  100 
 
 		 884 aa  1813    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_4482  putative cell wall binding repeat 2-containing protein  43.21 
 
 		 795 aa  52  0.00006  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.0000000203992  n/a   
 
 
-
 
NC_012034  Athe_0012  YD repeat protein  38.75 
 
 		 3027 aa  48.5  0.0005  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_008255  CHU_1051  endoglucanase-related protein  43.08 
 
 		 1295 aa  47.8  0.001  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.222685 
 
 
-
 
NC_009483  Gura_0740  fibronectin, type III domain-containing protein  36.52 
 
 		 409 aa  47.8  0.001  Geobacter uraniireducens Rf4  Bacteria  normal  0.128234  n/a   
 
 
-
 
NC_010814  Glov_1314  Fibronectin type III domain protein  35.42 
 
 		 211 aa  47.4  0.001  Geobacter lovleyi SZ  Bacteria  unclonable  0.000000146829  n/a   
 
 
-
 
NC_008752  Aave_2675  coagulation factor 5/8 type domain-containing protein  37.35 
 
 		 834 aa  46.2  0.002  Acidovorax citrulli AAC00-1  Bacteria  normal  1  normal  0.343316 
 
 
-
 
NC_013132  Cpin_3704  PA14 domain protein  34.78 
 
 		 2334 aa  47  0.002  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  0.205023 
 
 
-
 
NC_013132  Cpin_4289  glycoside hydrolase family 5  39.73 
 
 		 717 aa  45.8  0.004  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.162807  normal  0.0359435 
 
 
-
 
NC_012034  Athe_2120  Ig domain protein group 2 domain protein  33.78 
 
 		 1831 aa  45.4  0.005  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.348208  n/a   
 
 
-
 
NC_010524  Lcho_3794  fibronectin type III domain-containing protein  36.67 
 
 		 1973 aa  44.7  0.009  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>