Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0377 |
Symbol | |
ID | 8131291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 429549 |
End bp | 430730 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644863656 |
Product | hypothetical protein |
Protein accession | YP_003015971 |
Protein GI | 253686781 |
COG category | [S] Function unknown |
COG ID | [COG4269] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.983589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATCA ATACTTCAGA AAATAACACG CAGCATCGCG TGAAGTTTCA TGGTAAGGCC GGGGAATATT TTGCAATTTG GTTGGTGAAT GCGTTATTAA CGGTCATCAC TCTGGGAATT TATTCTGCCT GGGCTACCGT ACGTCGCCGT CGTTATTTTT ACGGCAACAC GGAAATTAAC GGTGACCGTT TTGATTACCA TGCAGATCCC ATTCAGATTC TCAAAGGGCG TTTGCTGGTT ATCGCTGGAA TCATTCTGTT TTATATCATA TTGGCGATGT CACCCACGCT CGGTACTATT ATCGCACTGG CATTTGCGGC ACTTATTCCA ATTATTGTGA TCCGTAACTG GCGTTATAAC GCCATTATGT CCAGCTACCG TGGCGTCCGT TTTAACTATG ATTGCCAGAC TGGCCGCGCG TATTGGGTAT TGCTGTTTTG CCCTATTCTG CTGATGCTGG CTTTTTATAT CGCTCTGGTT GTTGTGGTCA TGATCGGTAT GCAGAGTAAT AGCCCTATTC TGATTGGGTT CATTGCACTG GCGATTGCTA TCCCAGGGTT TGCTGCGGTA AACGGCATCA TGAAAATGAT GCAGCTTGAT TTCTATGTGA ATAACCTGTC CTTCGGGAAA ACCGCGTTTA AAGCGGAATT GACGAAAGCG GCATTTATTA AATTCGCCTT GGTTAGCCTG CTGATTTTTG TGCCTTTCCT GATCGCAGCG CTGTCGTTCA TGAGCTCCTT CATTTTCACG CTGTTCCAGA CCATTATGAT GGGCGGCGGC AATGAAGATC TCATACTGAT GATGCTGCTG AGCAATGCCT TTAATTTTAT TATGATGTTC ATTGTGGCGC TGCTGGGTGT GCTGGTTTCC AGCAGCTATC TGGTAGTCGC ACAGCGTAAT TATCTGTTTA ACCAGACGTC GCTGAATGGC GATGTGAAAT TGCACTCTTC CATGCAAACG CTGTCTTACA TGGGGCTGCT GATAACCAAT AGCCTGATCA CTATTTTCTC TTTGGGTTGG GCTGCGCCAG TAGCAGAGAT TCGTCACGCT CGTTATATCG CGAATGCAAC AGCGGTTGAA GGCGATCTGG CACTGCTGCA CGTTCAGGCA CATCAGGACA CGGCAAACAG CGCACTGGCC GAAGAAGCTG TGCAGGCGCT CGATTTAGGT GTTGGCCTGT AA
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Protein sequence | MTINTSENNT QHRVKFHGKA GEYFAIWLVN ALLTVITLGI YSAWATVRRR RYFYGNTEIN GDRFDYHADP IQILKGRLLV IAGIILFYII LAMSPTLGTI IALAFAALIP IIVIRNWRYN AIMSSYRGVR FNYDCQTGRA YWVLLFCPIL LMLAFYIALV VVVMIGMQSN SPILIGFIAL AIAIPGFAAV NGIMKMMQLD FYVNNLSFGK TAFKAELTKA AFIKFALVSL LIFVPFLIAA LSFMSSFIFT LFQTIMMGGG NEDLILMMLL SNAFNFIMMF IVALLGVLVS SSYLVVAQRN YLFNQTSLNG DVKLHSSMQT LSYMGLLITN SLITIFSLGW AAPVAEIRHA RYIANATAVE GDLALLHVQA HQDTANSALA EEAVQALDLG VGL
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