| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0315 |
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| Symbol | nudF |
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| ID | 8131229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 367217 |
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| End bp | 367849 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644863595 |
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| Product | ADP-ribose pyrophosphatase NudF |
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| Protein accession | YP_003015910 |
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| Protein GI | 253686720 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
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| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGTCTT CCGTATCCGG TCCGGTTACT TTCACCAAAG ATGATGTAGA AATTATTGCA
CGCGAAACGC TGTACGACGG TTTTTTTTCG CTGGAGCTTT ATCGTTTTCG TCATCGCTTG
TTTAATGGCG GTATGAGCGG TGAAGTTAGC CGTGAGATCC TGGAGCGTGG CCATGCAGTG
GTGTTGCTGC CTTACGATCC CGTACGTGAT GAAGTGGTAT TAATAGAACA GATTCGCATT
GCTGCCTATG ACACCAGCGC GTCTCCCTGG CTGTTTGAGC TGGTGGCTGG CATGATTGAA
CCGGGAGAAA GCCACGAAGA AGTGGCGCGG CGCGAAGCGC AGGAAGAAGC GGGGCTAAGG
GTTGGCCGTT GTCGACCGAT AATCAACTAT CTCGCTAGCC CCGGTGGCAC CAGCGAACGT
CTGGCGGTGA TGGTCGGCGA AGTCGATACG CGAACGGCAA AAGGCATTCA TGGTCTGTCG
GAAGAGAATG AAGATATTCG CGTACATGTC GTGAGCCGTG AGCAAAGTTA TCAATGGGTT
GAAGAAGGTA TCGTTGATAA CGCCGCGTCT GTCATTGCTT TGCAATGGTT GACGTTGCAC
CATGAAGAAC TGAAACGCGC GTGGGTGGAT TGA
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| Protein sequence | MASSVSGPVT FTKDDVEIIA RETLYDGFFS LELYRFRHRL FNGGMSGEVS REILERGHAV
VLLPYDPVRD EVVLIEQIRI AAYDTSASPW LFELVAGMIE PGESHEEVAR REAQEEAGLR
VGRCRPIINY LASPGGTSER LAVMVGEVDT RTAKGIHGLS EENEDIRVHV VSREQSYQWV
EEGIVDNAAS VIALQWLTLH HEELKRAWVD
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