| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0209 |
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| Symbol | |
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| ID | 8131117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 249999 |
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| End bp | 251423 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644863485 |
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| Product | transcriptional regulator, GntR family with aminotransferase domain |
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| Protein accession | YP_003015805 |
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| Protein GI | 253686615 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGTT ATCAGCACCT TGCTGGGTTG TTAGAACAGC GGATCGAACA AGGGTTATAC
CAAAGTGGAG AACGCCTGCC TTCTGTACGG GCGCTGAGTA CAGAACATGG TGTAAGCATC
AGTACCGTAC AGCAGGCCTA CCATCTGCTG GAAACCCGGC AGTTGATTAT GCCGCAGCCG
CGTTCGGGAT ATTTTGTCAC GCCGCGTAAG GCCACGCCGC CTGTACCCGC GCTAACGCGT
CCTGCCCAGC GTCCGGTTGA GATCACGCAG TGGGAGTCGG TACTGGAGTT GGTGAACGTG
CGTCTGGAAA CGAACGTGCT GAAATTTGGT AGCGGAATGC CGGATGTAAG CCAGCCGACC
ATCAAACCAC TGTGGAAAGA GATGGCTCGC CTCTGCCAGT ATCAGGATCC CCGAATCTTA
CAATATGACA GCGTATATGG CGTGCCTGCG CTGCGTGAAC AGATTGCCCG TCTTACCGTG
GACTGCGGCT GCCAGCTGAC TCAAGATGAT ATTGTGGTCA CGACCGGATG TCAGGAAGCT
CTATTTGTCG CTGTCCGCGC CGTTTGTCAG CCCGGCGACA TCGTGGCCGT TGAATCACCC
GCTTTTCCGG GCACGATGCA GATCCTTCGC GGACTGGATA TCAAAGCGAT CGAGATCCCA
ACCGATTCAG TAACGGGGAT CAGTCTCGAA GCATTGAGGC TGGCGCTGGA TCAATGGCCG
ATCAAAGCCG TCCTGCTGGT GCCGAGCTGC AATAACCCGC TTGGTTTCAT CATGCCAGAC
GCCCGTAAGA AATCGCTGGT GACGCTGGCG CAGCATTTCG ATATCGCCAT TATTGAAGAT
GATGCCTACG GTGAGCTGGC CTATGAATAT CCGCGTCCCC GCGCGATAAA GTCGTTTGAT
GAGGATGGGC GTGTGCTGTT GTGCAGCTCA TTTTCAAAGA ACCTGGCGCC CGGTTTGCGC
GTGGGTTGGA TCGCTCCGGG GCGTTATCTG GAGCGGGTGA TCCATACAAA ATACATCAGT
ACGGGATCGA CGGTGGTGCA GCCGCAACTA GCGGTGGCGG AGTTCATTCG CCAGGGGCAC
TATCAGCCTC ATCTGCGCCG CATGCGCGCC CAGTACAAAG CCAATCTGAG TACGTTTACC
TGCTGGGTGC GCGAGTATTT TCCGTCCAAT ATTTGCGTCA GTCGTCCGCA AGGGGGATTC
CTGATGTGGA TTGAACTGCC CGAATATTTT GATTCTCTCA AGCTCACCCG TGAGGTCAGA
AAATCAGGCA TACAGATCGC CGCCGGGTCG CTTTTCTCGG CCTCAGGGAA ATACCGCAAT
TGTATTCGAC TCAATTATGC CAATCGCTTC ACGGAAGAGA TGAGGGAAGG GCTGCGTATC
GTGGGTAATG AGGTTGCGAA GATGATGCAT ACGCCTCCTG ACTAG
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| Protein sequence | MTRYQHLAGL LEQRIEQGLY QSGERLPSVR ALSTEHGVSI STVQQAYHLL ETRQLIMPQP
RSGYFVTPRK ATPPVPALTR PAQRPVEITQ WESVLELVNV RLETNVLKFG SGMPDVSQPT
IKPLWKEMAR LCQYQDPRIL QYDSVYGVPA LREQIARLTV DCGCQLTQDD IVVTTGCQEA
LFVAVRAVCQ PGDIVAVESP AFPGTMQILR GLDIKAIEIP TDSVTGISLE ALRLALDQWP
IKAVLLVPSC NNPLGFIMPD ARKKSLVTLA QHFDIAIIED DAYGELAYEY PRPRAIKSFD
EDGRVLLCSS FSKNLAPGLR VGWIAPGRYL ERVIHTKYIS TGSTVVQPQL AVAEFIRQGH
YQPHLRRMRA QYKANLSTFT CWVREYFPSN ICVSRPQGGF LMWIELPEYF DSLKLTREVR
KSGIQIAAGS LFSASGKYRN CIRLNYANRF TEEMREGLRI VGNEVAKMMH TPPD
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