Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0189 |
Symbol | |
ID | 8131089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 218595 |
End bp | 219236 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644863457 |
Product | DNA-binding transcriptional repressor FabR |
Protein accession | YP_003015785 |
Protein GI | 253686595 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.368893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGCAGCA TAATGGGTGT CAGAGCACAA CAAAAAGAAC GGACTCGTCG TTCCCTTATT GAAGCTGCAT TTAGCCAGTT AAGCGCTGAG CGCAGTTTTG CCAGCCTGAG TCTGCGTGAA GTTGCCCGAG AAGCGGGTAT CGCGCCGACA TCTTTCTATC GTCATTTTCG TGACGTGGAT GAACTGGGGC TGACAATGGT TGATGAAAGC GGGCTGATGC TGCGTCAGTT AATGCGGCAG GCCCGGCAGC GTATTGCCAA GACTGGTAGC GTCATCAGGA CGTCGGTTTC CACCTTCATG GAATTTATTG GCAATAATCC TAATGCGTTC CGGCTGTTGC TGCGTGAACG CTCAGGGACG TCGGCGGCCT TTCGTGCGGC AGTCGCGCGC GAAATTCAGC ATTTCATCGC TGAACTGGCG GATTATCTTG AGGTGGAAAA CCATATTCCC CGCAGTTTTG CGGAAGCGCA GTCGGAAGCG ATGGTGACGA TTGTTTTCAG CGCGGGGGCA GAAGCTCTGG ATGTTTCTCT GGAACAACGT AAACAGCTGG AAGAGCGGCT GGTACTGCAA CTGCGGATGA TCGCCAAAGG TGCTTATTAC TGGTACAGAA AAGAACACGA TAGTAGCTTT ACCGTGCCAT AA
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Protein sequence | MGSIMGVRAQ QKERTRRSLI EAAFSQLSAE RSFASLSLRE VAREAGIAPT SFYRHFRDVD ELGLTMVDES GLMLRQLMRQ ARQRIAKTGS VIRTSVSTFM EFIGNNPNAF RLLLRERSGT SAAFRAAVAR EIQHFIAELA DYLEVENHIP RSFAEAQSEA MVTIVFSAGA EALDVSLEQR KQLEERLVLQ LRMIAKGAYY WYRKEHDSSF TVP
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