Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0052 |
Symbol | |
ID | 8130952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 60909 |
End bp | 61316 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644863322 |
Product | hypothetical protein |
Protein accession | YP_003015650 |
Protein GI | 253686460 |
COG category | [S] Function unknown |
COG ID | [COG5435] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCAGA TGAATGAAGG GACACTGGCT ATCCCTGCCG ATTGGCGCGA CGAATCACTC CACGTTTTTG TTCTTCCGGG AGATGCCATC AATCTGGTTG TCAACCGCAC CCCGATTGAT TTCGGTCTGA CGGCAGAAAC GGTTTATCAG CAGACACTGG CTCAATTTGC GGCACACCTG AAAGGGTATG AAGAGCGTGG CGTTTGGACA TTGACGTTGG ATGGGCAACC CGCACACGGT CTGGAATATA CCTGGCGGTC ACCGGAAGGC CCAATGCATC AGGTTGTCGT GATGCAGGTA CGCGGTGAGT TATTACTGAC GTTTACCGTA ACCGTAGCAG GCGAGCTCAG TGCGGAGCAG AAAACAGCAA TGCTGGCGGT GGTCGAGACC TTTAAAGCCG CCACCTGA
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Protein sequence | MYQMNEGTLA IPADWRDESL HVFVLPGDAI NLVVNRTPID FGLTAETVYQ QTLAQFAAHL KGYEERGVWT LTLDGQPAHG LEYTWRSPEG PMHQVVVMQV RGELLLTFTV TVAGELSAEQ KTAMLAVVET FKAAT
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