Gene PA14_71960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_71960 
Symbolwzm 
ID4384946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp6413789 
End bp6414586 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content64% 
IMG OID639328399 
Productmembrane subunit of A-band LPS efflux transporter 
Protein accessionYP_793928 
Protein GI116053601 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCTTG GCTTGTCTCG TTCCTTGTGG GGCTATCGTG GCTTCGTTCT CGGCAGCGTC 
AAGCGCGAGT TCCAGTCGCG CTACCGCGGG TCGCTGTTCG GCGCGCTGTG GACGGTGCTC
AATCCGCTGT CGATGATCGT CGTCTACACG GTGATCTTCT CCCAGGTGAT GCGCGCGCGC
CTGCCGGGCG TCGACGACGG CCTGGCCTAC AGCGTCTATC TCTGCGCCGG GCTGCTGACC
TGGGGCCTGT TCGCGGAAAT CACCTCGCGC AGCCAGAGCA TGTTCATCGA GAACGCCAAC
CTGCTGAAGA AGATCAGCTT CCCGCGCATC TGCCTGCCGG TCATCGTACT GCTCAACGCC
GGGGTCAATT TCGCCATCAT CCTCGCCTTG TTCCTCGGCT TTCTCGCACT CAGCGGGCGC
CTGCCGGGCG CGGCATTGCT CGCGCTGGTG CCGCTGCTGG CGATCCAGGT GCTGTTCGCG
GCGGGACTGG GGATGATCCT CGGGGTGCTC AACGTGTTCT TCCGCGACGT CGGCCAGTTG
TTCGGCATCT GTCTGCAGTT CTGGTTCTGG CTGACGCCGA TCGTCTATCC GATCGGCATC
CTGCCCGAGG GTATCCGCTC GCTGATCGAA CTCAACCCGA TGACCGCGCT GATGCGCAGC
TACCAGCAGC TGTTCCTCCA CGGGCAATGG CCGGACTGGC CTTCATTGCT GCCGATCACC
CTGCTGGCGC TGCTGCTGTG CGCGCTCGGC CTGCGTCTGT TCCGCCAGCG GGTCGGCGAA
ATGGTGGATG AACTCTGA
 
Protein sequence
MLLGLSRSLW GYRGFVLGSV KREFQSRYRG SLFGALWTVL NPLSMIVVYT VIFSQVMRAR 
LPGVDDGLAY SVYLCAGLLT WGLFAEITSR SQSMFIENAN LLKKISFPRI CLPVIVLLNA
GVNFAIILAL FLGFLALSGR LPGAALLALV PLLAIQVLFA AGLGMILGVL NVFFRDVGQL
FGICLQFWFW LTPIVYPIGI LPEGIRSLIE LNPMTALMRS YQQLFLHGQW PDWPSLLPIT
LLALLLCALG LRLFRQRVGE MVDEL