| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_59540 |
|---|
| Symbol | |
|---|
| ID | 4384910 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | + |
|---|
| Start bp | 5297117 |
|---|
| End bp | 5299366 |
|---|
| Gene Length | 2250 bp |
|---|
| Protein Length | 749 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639327392 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_792944 |
|---|
| Protein GI | 116052629 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0020175 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 2.4674200000000003e-18 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCTC TGACCCAACC GGCCGCCCTC GCCGCCTCCC ACCTGAACAT CAACCTGACC
GACTTCATCG ACGAGTTCGG CGACGAGCTC CTGGAGTCGC TCAATCGCTC CAACCCCCCG
GTCTATACCG GCTCCGTCAA CGCTCACCGC CAGTTGGTGA TGGACCGACT CAAGCGCAAG
CCCTTCGCGG CCCAGGCCGA GGTCGTCCAG GCCATCACCG CCCTGCTGCT GGACCGTAAC
GAGCAGGCCG GAATCATCAA CGCCGAGATG GGCACCGGGA AAACCATGAT GGCCATCGCT
GTCGCAGCGG TCATGCACGC CGCCGGCTAT CGCCGGACCC TGGTCGTCTC TCCGCCGCAC
CTGGTCTACA AGTGGCGCCG CGAGATCCTG GAGACCATCC CAGCCGCCCG CGTCTGGGTA
CTCAATGGCC CAGATACTCT ACTCAAGCTG CTCAAGCTGC GAGATCAGAT GGGCGACGCC
TACGACGGGC GCCAGGAGTT CTTCATCCTC GGCCGCGTGC GGATGCGGAT GGGTTTCCAC
TGGCGGCTCG CCTGCTGGAA GAAACGCGCC GCCGGCGGCC AACTGCTCGC TGCGTGCCCG
GATTGCGGAC AGGTCCTCGA GGACCTGGAA GGCAACCTGG TCACGGTGGA GGAGTTCGAG
CGTGGTGACC GTCGACGTAC CTGTTCCTCC TGCCGTGGGG CGCTCTGGAC GCTGATCCGA
CCAGGCAAGC CCGACGGCGG CAACCGGCGC GCAACGATTC TCAAGTCGAT GTGCCGGATA
CCAACCATCG GCCCGGTCAG GGCGGAGCGC CTGCTGAACG ACTTCGGCGA GGACTTCCTG
GCCACGATGT TGGTGGACAA CGTCTCGGAG TTCATCAACC TGATGGACGC CAAGGGCAAC
TTCGTCTTCA GCGATCGGCA GGCCAAACGC ATGGAGCGAT CGATGGCAAA CATCGAGTTC
GGCTTCGGTG AAGGCGGCTA CCAACCGACC GAGTTCATCA AGCGCTACCT ACCTGATGGC
TACTTCGACC TGCTGGTGCT GGACGAGGGA CATGAGTACA AGAACAGCGG CTCGGCCCAG
GGCCAGGCCA TGGGCGTTCT CGCAGCCAAG GCACGGAAAA CCGTGCTGCT GACCGGAACG
CTCATGGGCG GCTACGCCGA CGATCTGTTC TATCTCCTGT TCCGCATCCT CACCCAGCGC
ATGATCGAGG ACGGCTATCG GCCCAACGCG CGCGGCAGCA TGGCTCCCGC AGCCATGTCG
TTCATGCGCG ACCACGGTGT GCTCAAGGAT ATCTACACCG AGCGCGACGG TGATTCGCAC
AAGACAGCGC GGGGCAAGAA GCTCTCGGTA CGCACGGTGA AGGCTCCCGG CTTCGGCCCA
AAGGGCATCC ACCGCTTCGT ATTGCCGTTC ACCGTGTTCC TGAAGCTCAA GGATATTGGT
GGCAACGTAC TGCCCGACTA CCAGGAGGAG TTCATCGACG TGCCCATGGC GCCTGAGCAG
GCTTCGGCCT ATCAGCGCCT GGCGGCCACG CTGACAGCGG AGCTCCGCCA GGCTCTGGCG
CGACGAGATA CCACGCTCCT GGGCGTGGTC CTCAACGTGC TGCTGGCTTG GCCGGACTGC
TGTTTCCGAC CGGAGATCGT CAAGCATCCG CGAACCCGGG ACACACTGGC CTTCGTGCCA
GCGATCTTCG GTGACGAGCA GTTGATACCC AAGGAGCAGG TGCTGGTGGA CCTCTGCTTC
GAGGAGAAAG CGAAGGGCCG CAAGGTTCTG GCATACACCG TCTACAGCGG GACGCGCGAC
ACCACGTCCA GGCTGAAGAA AGTGCTCGAG CAATCCGGGC TGAAGGTGGC AGTGCTACGT
GCTTCGGTCG ATACCGCTCG ACGCGAGGAT TGGATCCTCG ACCAGGTCGA TCGCGGCATC
GATGTGCTGA TCACCAACCC GGAGCTGGTG AAGACCGGGC TGGACTTGCT CGACTTCCCG
ACCATCGCGT TCCTGCAAAC GGGCTACAAC GTGTACACCC TGCAGCAGGC CGCGCGGCGG
TCGTGGCGGA TCGGGCAGAA GCACCCGGTG AGGGTGGTGT TCTTCGGCTA CGCCGGCAGC
TCGCAGATCA CCTGCTTACA GCTGATGGCC AAGAAGATCG CTGTGGCTCA GAGCACGTCG
GGAGACGTTC CCGAGTCAGG TCTCGACTCG TTGAACCAGG ATGGGGATTC TGTGGAGATG
GCGTTGGCAC GACAACTCAT CGCAGCATGA
|
|---|
| Protein sequence | MNALTQPAAL AASHLNINLT DFIDEFGDEL LESLNRSNPP VYTGSVNAHR QLVMDRLKRK
PFAAQAEVVQ AITALLLDRN EQAGIINAEM GTGKTMMAIA VAAVMHAAGY RRTLVVSPPH
LVYKWRREIL ETIPAARVWV LNGPDTLLKL LKLRDQMGDA YDGRQEFFIL GRVRMRMGFH
WRLACWKKRA AGGQLLAACP DCGQVLEDLE GNLVTVEEFE RGDRRRTCSS CRGALWTLIR
PGKPDGGNRR ATILKSMCRI PTIGPVRAER LLNDFGEDFL ATMLVDNVSE FINLMDAKGN
FVFSDRQAKR MERSMANIEF GFGEGGYQPT EFIKRYLPDG YFDLLVLDEG HEYKNSGSAQ
GQAMGVLAAK ARKTVLLTGT LMGGYADDLF YLLFRILTQR MIEDGYRPNA RGSMAPAAMS
FMRDHGVLKD IYTERDGDSH KTARGKKLSV RTVKAPGFGP KGIHRFVLPF TVFLKLKDIG
GNVLPDYQEE FIDVPMAPEQ ASAYQRLAAT LTAELRQALA RRDTTLLGVV LNVLLAWPDC
CFRPEIVKHP RTRDTLAFVP AIFGDEQLIP KEQVLVDLCF EEKAKGRKVL AYTVYSGTRD
TTSRLKKVLE QSGLKVAVLR ASVDTARRED WILDQVDRGI DVLITNPELV KTGLDLLDFP
TIAFLQTGYN VYTLQQAARR SWRIGQKHPV RVVFFGYAGS SQITCLQLMA KKIAVAQSTS
GDVPESGLDS LNQDGDSVEM ALARQLIAA
|
|---|
| |