| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_59290 |
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| Symbol | pilQ2 |
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| ID | 4382737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008463 |
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| Strand | + |
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| Start bp | 5282137 |
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| End bp | 5283717 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639327372 |
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| Product | type IV B pilus protein |
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| Protein accession | YP_792924 |
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| Protein GI | 116052609 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00365421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.000000107919 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGAACC TTCAGATTGC CGCGCTTGCG CAGCCCTCCA TGGTGACCCA ACTGCTCACC
GCCGACGGTG GTGAATGGGA GGTATCGAAG CACCTGCAGG AAATCATGGC TCTGGCTGCC
GACGGCACGC TCTATCTATC GGAGAGCCAC CAGAACGACA TACACGTTCT GTCGTTCATC
GACCGTCTCG ATCGCCGTGG CTTCCGATAC CAGCTCAACC TCACCGACCT GCAGACCATT
CACCAGCTTT ACCGCGCCGT CGCCATGGAC GGCCTGGTCG ATAGCGATGG CCAGCGCGCC
ACCCAGATGC AGGAGCGCGT GGTCAAGATC ATTCGTAAGG CCACTGAGCT GCGCGCCAGT
GACGTGCATT TCGTCGTGAG TCCCGCCGGC ACCGGCAGCA AGATCCGTTT CCGCGTCGAC
GGCCTGCTGA AGACCGTCGA GCAGTTCCGC AGCCAGGAGC TGCACGAACT CTGTGCAACC
ATCTACCAAT CCATGTGCGA CGTGGCCGAG CCACTGTTCA AGCCGCAACT GGACCAGGAC
GCGCGGATGA GCCAGACCTT CGTCGAGAAG CTCAACCTGT TCAGTGCCCG GATCGCCACC
CGCCCGCGTG CCGGGGGGTT CCTGATGATC CTGCGACTGC TCTACGACGA CACCGGCCTC
GACAGCCTGG AGCAGCTCGG CTACCTGCCC GAGCAGAACG CACTGTTCGA TCGCATGATG
CGTATGCCCT ACGGCATCAA CATCCTGTCC GGCCCCACCG GGTCAGGAAA GTCGATGACC
TTGAAGGTCA CCCTGGAAGG CCTCGACAAG CTCCATGGCG GATCCAAGCA CATCCTGACC
ATCGAGGATC CGCCGGAATA CCGCATTCGC GGCGAAGGCA TCAACCAGAC CCCACTGGTC
TACGACGCCA CCGACCCAGA CGCAGAACGC CAGGCCTGGG CCGCGGGCAT CGCCAACGGC
ATGCGCCTGG ATCCGGACTA CATGATGATC GGCGAAGTAC GCGACCTCTT CGCCGCTGTC
GCCGCGTTCC GTGGTGCGAT GACCGGGCAC GGCCTATGGT CGACCCTGCA CACCAACAGC
GCGATCGGCA TTGTCCAGCG CCTGAAGGAC CTGGGCGTCG ACCCCGGCTT GCTGTTCGAT
CCGGCCCTGC TGACCGGCCT GATCAACCAG AGCCTGCTGC CCAAGCTCTG CCCCCACTGC
AAAGTGCGCT TCCAAGACCA CCAAGACCAA CTCGCGCCCG ACTTGGTCGA ACGGGTCCGA
CGCTTGACCG ATGTTTCCCA GGTTCACGTC AAGGGGCCTG GCTGCCAGGC CTGCCGTGGC
TCCGGGGTCA ACGGCCGCTC GATCGTCGCC GAGGTGGTTC TGCCCACCCT CGCCTTCATG
CGTGTGTTCG CCAAAGGCGG CCCAGCCGAG GCACGCAACT ACTGGGTCAA GACCATGCAG
GGCATCACCA AGCACGCCCA CGCCATCCGC CGCATCAACG AGGGCATGTT CGACCCGCAG
ATGGTCGAGG ATTTCATTGG GCCACTCGAC TTCGATGAGC ATCTGCTCGA CGACAGCTTC
TACTCGCAGG AGGCGTGCTG A
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| Protein sequence | MTNLQIAALA QPSMVTQLLT ADGGEWEVSK HLQEIMALAA DGTLYLSESH QNDIHVLSFI
DRLDRRGFRY QLNLTDLQTI HQLYRAVAMD GLVDSDGQRA TQMQERVVKI IRKATELRAS
DVHFVVSPAG TGSKIRFRVD GLLKTVEQFR SQELHELCAT IYQSMCDVAE PLFKPQLDQD
ARMSQTFVEK LNLFSARIAT RPRAGGFLMI LRLLYDDTGL DSLEQLGYLP EQNALFDRMM
RMPYGINILS GPTGSGKSMT LKVTLEGLDK LHGGSKHILT IEDPPEYRIR GEGINQTPLV
YDATDPDAER QAWAAGIANG MRLDPDYMMI GEVRDLFAAV AAFRGAMTGH GLWSTLHTNS
AIGIVQRLKD LGVDPGLLFD PALLTGLINQ SLLPKLCPHC KVRFQDHQDQ LAPDLVERVR
RLTDVSQVHV KGPGCQACRG SGVNGRSIVA EVVLPTLAFM RVFAKGGPAE ARNYWVKTMQ
GITKHAHAIR RINEGMFDPQ MVEDFIGPLD FDEHLLDDSF YSQEAC
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