Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_56770 |
Symbol | |
ID | 4382469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 5056300 |
End bp | 5056902 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639327157 |
Product | putative transporter |
Protein accession | YP_792710 |
Protein GI | 116052399 |
COG category | [R] General function prediction only |
COG ID | [COG1279] Lysine efflux permease |
TIGRFAM ID | [TIGR00948] L-lysine exporter |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCAGA GCTATCTCAA CGGCATCCTG GTGGCTGCCG GCCTGATCAT CGCCATCGGC GCGCAGAATG CCTTCGTCCT CGCGCAGAGC CTGCGCCGCG AGCATCACCT CTCGGTGGCC GCGCTCTGCG TGTTCTGCGA CGCGGTGCTG GTCAGCCTCG GCGTGTTCGG CCTGGCCAAG CTGCTGCTGG AAAACCCGAC GCTGCTGGCC ATCGCCCGCT GGGGCGGGAT CGCCTTCCTG ACCTGGTACG GGCTCAAGGC GCTGCTTCGC GCGTTGCGCC CGGACGCTCT CGGCAACGCC GCGGAAACCG GGCCACGCTC GCGCAAGGCG GTGCTTCTGG CGGCACTGGC GGTCACCCTG CTCAACCCCC ACGTCTATCT CGATACCGTA CTTCTGATCG GTTCGCTCGG CGCCCAGCAG GCCGCGCCGG GCGCCTATGC CCTCGGCGCG GCCAGCGCCT CGCTGATGTG GTTCTTCGCC CTCGCCCTCG GCGCGGCGTG GCTGGCCCCC TGGCTGGCGC GCCCGGCCAC CTGGCGCCTG CTCGACCTGA TGGTGGCGGC CATGATGCTG GGCATGGCCG CGCAACTGCT GTTCCGGGGA TAA
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Protein sequence | MWQSYLNGIL VAAGLIIAIG AQNAFVLAQS LRREHHLSVA ALCVFCDAVL VSLGVFGLAK LLLENPTLLA IARWGGIAFL TWYGLKALLR ALRPDALGNA AETGPRSRKA VLLAALAVTL LNPHVYLDTV LLIGSLGAQQ AAPGAYALGA ASASLMWFFA LALGAAWLAP WLARPATWRL LDLMVAAMML GMAAQLLFRG
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