Gene PA14_56050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_56050 
Symbol 
ID4382398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp5004899 
End bp5005900 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content66% 
IMG OID639327105 
Producthypothetical protein 
Protein accessionYP_792658 
Protein GI116052347 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCGAG GCTGGTTACT GCTGTTCGGT TTGATCGGTG CCTCGCTGAT TCCGCTGGTG 
CTCGGCGGCA GCGACATGTT CCCGCGCTTG CGCGCCTTCC CGCTGGACAG CCTGCTGCTG
ATGTTCGGCA TGATCGTGGT CTGCTGGTTC ATCAACGGCC TACGCCTGCG CTTGCTGCTC
GCCGGGCGCG CCGGCAAGCT CGGGCAGTTG CAGAGCGTCG GCATCATCAT GGCCAGCGAA
TTCGCCTTCT GCGCCACTCC GGGCGGCAGC GGCGGGCCGT TGACCCTGAT GGCGTTGCTG
GCCCGGCGCG GCCTGCGCCC GGCACAGACC AGCGCGGTGT TCGCGGTCGA CCAATTGGCC
GACCTGACGT TCTTCCTCTG CGCCCTCGGC GCGATCCTGA TCTATGCCCT CAGCCATTCG
CTGAGCCCGA ACATGGAATC GAGCCTGATC TTCAGCGCGG TATTCCTGGT CGGCCTGTTC
GTCGGCGCGG TAATGCTGAT CCGCTACCTG CACCAGGTGA TCCGCTTCAA CGGGCGGGTT
CTAGCGCGGC TCGGCGTGTC ATCGCGCAAG CGCCTGCACT GGGGCCGCAA GATCCTGCAT
TTCCGCATTG CCCTGCACGA CAGCCTGCGC CTGCCGAAAC GACGCCTGCT GGCGGTCTTC
CTTCTCAGCA GTACGCACTG GCTGCTGCGC TTCAGCGTGC TCGACCTGAC CTTGCGCGGC
CTGGGAGTGG ACATCCAGTG GGCCTGGACC TTCCTGATCC AGATGGTCTC GCTCAGCGCC
GGACAGCTCT CGCTGATCCC CGGCGGCGCC GGCGGCACCG AGCTGACCTC GGCGGCCCTG
CTGGCCCCCA TGATCGGCAA GTCGACGGCG GCGGCGGCCA TCGTCATCTG GCGAGCGGTG
ACCTTCTATT TCTACCTCGT CGCCGGCGGC CCGGTGTTCG CCGTGCTCGC CGGACGCCCG
CTGCTGAAGA AGCTGATCAG CAGTCGCGAG GCTTCTTCCT GA
 
Protein sequence
MSRGWLLLFG LIGASLIPLV LGGSDMFPRL RAFPLDSLLL MFGMIVVCWF INGLRLRLLL 
AGRAGKLGQL QSVGIIMASE FAFCATPGGS GGPLTLMALL ARRGLRPAQT SAVFAVDQLA
DLTFFLCALG AILIYALSHS LSPNMESSLI FSAVFLVGLF VGAVMLIRYL HQVIRFNGRV
LARLGVSSRK RLHWGRKILH FRIALHDSLR LPKRRLLAVF LLSSTHWLLR FSVLDLTLRG
LGVDIQWAWT FLIQMVSLSA GQLSLIPGGA GGTELTSAAL LAPMIGKSTA AAAIVIWRAV
TFYFYLVAGG PVFAVLAGRP LLKKLISSRE ASS