Gene PA14_54180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_54180 
Symbol 
ID4384730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4806630 
End bp4808693 
Gene Length2064 bp 
Protein Length687 aa 
Translation table11 
GC content69% 
IMG OID639326944 
Producthypothetical protein 
Protein accessionYP_792503 
Protein GI116048697 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCTT CCGGCCTTTT CCCTTCCCGT CCGCTCTGGC CTCTCACGCC ACTGGCGCTG 
GCCTGCCTGA TCGTTTCGGG GGAAACGCTC GGCGCCGACG GCCGCCCCAG CGAATTGCCC
TCCCAGGTGA TCACCGCCAA CCCGCTGGGC AACGAATCTC CCGCCACGCC CAGCAGCGTG
CTCGAAGGCG ACGAGCTGAC CCTGCGTCAG AAAGGCAGCC TCGGCGAAAC CCTCAACGGC
CTGCCCGGGG TGTCCTCCAC CTACTTCGGA CCGGGCGCCA GCCGACCGGT GATCCGCGGC
ATGGACGGCG ACCGCATCCG CCTGCTGCGC AACGGCGTCG GCGCGCTCGA CGCCTCGTCG
CTGTCCTACG ACCACGCGGT GCCGGAAGAC CCCAACAGCG TCGAGCGCCT GGAAGTGGTA
CGCGGCCCGG CCGCCCTGCT CTACGGCGGC AATGCCATCG GCGGGGTGGT GAACAGCTTC
GACAACCGCA TTCCCAGCGA ACCCGTCGAC GGCATCCACG GCAGCGGCGA ACTGCGCTAC
GGCGGCGCCG ACACCACCCG TAGCCGCTCC GGCGCACTGG AGGCCGGCGA CGGCAACTTC
GCCCTGCACG TGGACGCCGC CAGCCGCGAG TTCAACGACG TCAGGATTCC CGGCTACGCC
CATTCCAGCC GCCAGCGGCA GATCGACGGC GACACCGGCA AGCATCGGGT GCAGAACAGC
GACGGCCGCC AGGACGGCGG CGCCGTCGGT GGCTCCTATC ACTGGGAGCA CGGTTACGCC
GGCCTCTCCT ACAGCGGCTA CGACAGCAAC TATGGCTCGC CGGCCGAGGA CGACGTGCGC
CTGAAGATGC AGCAGGACCG CTACGCCTTC GCCTCCGAGA TCCGCGACCT CGAAGGCCCG
TTCACCTCGC TGAAGCTGGA CGCCGCCTAT ACCAAGTACG AGCACAAGGA AATCGAGGAC
GGCGAGACCG GCACCACCTT CAAGAACGAA GGCTACGAAG GCCGCATCGA GGCCCGCCAC
CGCCCGCTCG GCCCGCTGAA CGGGGTGGTC GGCGCGCAGT TCGCCAACAG CCGCTTCTCC
GCCCTCGGCG AGGAAGCCTT CGTGCCGCAC ACGGAAACCG ACAGCGCCGC GCTGTTCGCC
CTGGAGGAAT GGAAGCTCAG CGACCGCCTC GACCTCAGCT TCGGCGCCCG CCTGGAGCAC
ACCCGCGTGG ACCCCGACGC CAAGGGCAAC GAGCGCTTCG CCGAGAACGA CGGTTCGCAG
AGCTTCACCA CCGGCAGCCT GTCCACCGGC GCGGTGTACA AGCTGACGCC GATCTGGTCG
CTGGCCGCCA CCCTCAGCTA CACCGAGCGC GCACCGACCT TCTACGAGCT GTACGCCAAC
GGTCCGCACG CCGCCACCGG CACCTACGAG GTAGGCGATG CCGACGCGGA CAAGGAAAAG
GCGGTCTCCA CCGACCTCGC CCTGCGCTTC GACAACGGCG TGCACAGGGG CAGCGTCGGG
GTGTTCTACA GCCGCTTCTC CAACTACATC GGCCTGCTCG CCAGCGGTCG CCATCGCAAC
GAGGAAGGCG AAGTGGTCGC CGCCAGCGAC GACGAGGCGC TGCCGGAATA CCTCTACAGC
GGCGTTCGCG CGGACTTCTA CGGCGTCGAG GCGCAGGACC GCATCCACCT GCTGGAAAGC
CCGTACGGCA ACTTCGACCT GGAACTCTCC GGGGACTACA CCCGCGCCAA GAACAAGGAC
ACCGGCGAAC CGCTGCCACG CATCGCCCCG CTACGCCTGA ACACCGCGCT GATCTGGGAG
TTGCAGCAGT GGCAGGCGCG GGTCGACGTC GAACACGCCG CCTCGCAGCA CCGCGTGCCG
GAGGAAGAAC TCTCCACCGA CGGCTACACC ACCCTCGGCG CCAGCCTCGG CTACAACTTC
GACCTCGGCG AGAGCCGCTG GCTGGCCTTC GTCAAGGGCA CCAACCTGAC CAACCAGACC
GTGCGCTACG CCAGTTCGAT CCTGCGCGAC CGGGTGCCGG CGGCGGGACG CGGCATCGAG
GCGGGGGTGA AGGTGGCGTT CTGA
 
Protein sequence
MSSSGLFPSR PLWPLTPLAL ACLIVSGETL GADGRPSELP SQVITANPLG NESPATPSSV 
LEGDELTLRQ KGSLGETLNG LPGVSSTYFG PGASRPVIRG MDGDRIRLLR NGVGALDASS
LSYDHAVPED PNSVERLEVV RGPAALLYGG NAIGGVVNSF DNRIPSEPVD GIHGSGELRY
GGADTTRSRS GALEAGDGNF ALHVDAASRE FNDVRIPGYA HSSRQRQIDG DTGKHRVQNS
DGRQDGGAVG GSYHWEHGYA GLSYSGYDSN YGSPAEDDVR LKMQQDRYAF ASEIRDLEGP
FTSLKLDAAY TKYEHKEIED GETGTTFKNE GYEGRIEARH RPLGPLNGVV GAQFANSRFS
ALGEEAFVPH TETDSAALFA LEEWKLSDRL DLSFGARLEH TRVDPDAKGN ERFAENDGSQ
SFTTGSLSTG AVYKLTPIWS LAATLSYTER APTFYELYAN GPHAATGTYE VGDADADKEK
AVSTDLALRF DNGVHRGSVG VFYSRFSNYI GLLASGRHRN EEGEVVAASD DEALPEYLYS
GVRADFYGVE AQDRIHLLES PYGNFDLELS GDYTRAKNKD TGEPLPRIAP LRLNTALIWE
LQQWQARVDV EHAASQHRVP EEELSTDGYT TLGASLGYNF DLGESRWLAF VKGTNLTNQT
VRYASSILRD RVPAAGRGIE AGVKVAF