Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_47960 |
Symbol | |
ID | 4385549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 4269374 |
End bp | 4270096 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639326424 |
Product | putative ATP-binding component of ABC transporter |
Protein accession | YP_791989 |
Protein GI | 116049208 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.0293846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGA TCAGCGGCGT GCACAAGGCC TACGGCCAGT TCGAGGTGGT CAAGGGCGTC GACCTGAGGG TGGACAAGGG CGAGGTGCTG TCGATCATCG GCGGCTCCGG TTCCGGCAAG TCGACCCTGC TGATGTGCAT CAACGGCCTG GAGCCGATCC AGCGCGGCAG CATCCGCGTC GACGGCATCG ACGTGCATGC CCGCGGCACC GACCTCAACC GCCTGCGGCG GAAGATCGGC ATCGTCTTCC AGCAGTGGAA CGCCTTCCCC CACCTGACCG TGCTGGAAAA CGTCATGCTC GCGCCGCGCA AGGTGCTCGG CAAGAGCCGC GCCGAAGCCG AGGCGATGGC GCTGAAGCAA CTTACCCACG TCGGTCTCGG CGACAAGCTC AAGGTCTTCC CCCAGCGCCT TTCCGGCGGC CAGCAACAGC GCATGGCGAT CGCCCGGGCG CTGGCGATGT CGCCGGACTA CATGCTGTTC GACGAAGCCA CCTCGGCGCT CGACCCGCAG TTGGTCGGCG AGGTGCTGGA CACCATGCGC CTGCTCGCCG AGGAAGGCAT GACCATGGTC CTGGTCACCC ACGAGATCCG CTTCGCCCGC GACGTGTCCG ACCGGGTGGC GTTCTTCCGC AATGGCCTGG TCCACGAGAT CGGCACCCCC GACCAGGTGA TCGGCAACCC GCAGCGGCCG GAGACGGTGG AATTCCTCCG CTCGGTGCTC TGA
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Protein sequence | MIEISGVHKA YGQFEVVKGV DLRVDKGEVL SIIGGSGSGK STLLMCINGL EPIQRGSIRV DGIDVHARGT DLNRLRRKIG IVFQQWNAFP HLTVLENVML APRKVLGKSR AEAEAMALKQ LTHVGLGDKL KVFPQRLSGG QQQRMAIARA LAMSPDYMLF DEATSALDPQ LVGEVLDTMR LLAEEGMTMV LVTHEIRFAR DVSDRVAFFR NGLVHEIGTP DQVIGNPQRP ETVEFLRSVL
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