Gene PA14_47960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_47960 
Symbol 
ID4385549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp4269374 
End bp4270096 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content67% 
IMG OID639326424 
Productputative ATP-binding component of ABC transporter 
Protein accessionYP_791989 
Protein GI116049208 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0293846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA TCAGCGGCGT GCACAAGGCC TACGGCCAGT TCGAGGTGGT CAAGGGCGTC 
GACCTGAGGG TGGACAAGGG CGAGGTGCTG TCGATCATCG GCGGCTCCGG TTCCGGCAAG
TCGACCCTGC TGATGTGCAT CAACGGCCTG GAGCCGATCC AGCGCGGCAG CATCCGCGTC
GACGGCATCG ACGTGCATGC CCGCGGCACC GACCTCAACC GCCTGCGGCG GAAGATCGGC
ATCGTCTTCC AGCAGTGGAA CGCCTTCCCC CACCTGACCG TGCTGGAAAA CGTCATGCTC
GCGCCGCGCA AGGTGCTCGG CAAGAGCCGC GCCGAAGCCG AGGCGATGGC GCTGAAGCAA
CTTACCCACG TCGGTCTCGG CGACAAGCTC AAGGTCTTCC CCCAGCGCCT TTCCGGCGGC
CAGCAACAGC GCATGGCGAT CGCCCGGGCG CTGGCGATGT CGCCGGACTA CATGCTGTTC
GACGAAGCCA CCTCGGCGCT CGACCCGCAG TTGGTCGGCG AGGTGCTGGA CACCATGCGC
CTGCTCGCCG AGGAAGGCAT GACCATGGTC CTGGTCACCC ACGAGATCCG CTTCGCCCGC
GACGTGTCCG ACCGGGTGGC GTTCTTCCGC AATGGCCTGG TCCACGAGAT CGGCACCCCC
GACCAGGTGA TCGGCAACCC GCAGCGGCCG GAGACGGTGG AATTCCTCCG CTCGGTGCTC
TGA
 
Protein sequence
MIEISGVHKA YGQFEVVKGV DLRVDKGEVL SIIGGSGSGK STLLMCINGL EPIQRGSIRV 
DGIDVHARGT DLNRLRRKIG IVFQQWNAFP HLTVLENVML APRKVLGKSR AEAEAMALKQ
LTHVGLGDKL KVFPQRLSGG QQQRMAIARA LAMSPDYMLF DEATSALDPQ LVGEVLDTMR
LLAEEGMTMV LVTHEIRFAR DVSDRVAFFR NGLVHEIGTP DQVIGNPQRP ETVEFLRSVL