Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_46650 |
Symbol | |
ID | 4382281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 4158308 |
End bp | 4159150 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639326316 |
Product | putative transmembrane sensor |
Protein accession | YP_791881 |
Protein GI | 116049316 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0000141667 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.00000417147 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCCAGC CCTCGAAACG GAATGGGCAG GTTCCGCTGG ACGACGCCCT GGAGCGCCAT CGCGACGCGC TGAAGGACCT GTTCCCGCTG CCGCCCTCCC GGCCGAAATC GCGCAAGGCA AGCAAGGCGG CCGGCGTCGC GCTATTGCTG GCGCTGGCCA TCGGCGCCCT GACCTGGCTG GACCCGGCCT ACAAGCGCGA GCGCTTCGCC ACCGCCATCG GTGAGCGGCG CGACGTGACC CTGGCCGACG GCAGCCAGCT CCTGCTCGAC AGCGGCAGCC AGATCGAGGT CAGTTGGCAC CCGCTCAGCC GCCGGGTCGC GTTGCGCGCG GGGCAGGTGC TTTTCGAGGT ATCCCCGGCG CGCTATCGGC CCTTCGTGGT GTCCGCGGGG TCGACCGACG TCCGCGTGCT CGGCACCCGG TTCAACGTGC GCCGCCTGGA CGACGACGTC CGCGTGACCC TGGAGCGTGG CCGGGTGGAG GTCGGCACCT CGGCTACGGC GCAAGCGCCA GTCGTGCTCC TGCCGGGCCA GCAGGTCGAT GCCATTGGCG GGCAACTGAT GCCGCTGGCC AAGGTCGATG CCGCCACGGC GATGGCCTGG AAAGACGACC GCCTGGTCTT CGAGCGCACG CCCCTGGGCG AAGCCGTCGC GCTGCTACGC CATTACCGCA AGGCGCCCAT TCTCCTGGAC GACCCCAGCC TGGCCTCCCT CCGGCTGACC GGCGTCTTCG CCGCGCACAA CGTCGACCGG CTGCTCGACC TGCTGCCGAG CATCCTTCCC GTGGCCGTGT CGCGGCAGGA GGACGGCAGT GTCGAGATCC AACGCAAATC GACTCGAAAA TAA
|
Protein sequence | MTQPSKRNGQ VPLDDALERH RDALKDLFPL PPSRPKSRKA SKAAGVALLL ALAIGALTWL DPAYKRERFA TAIGERRDVT LADGSQLLLD SGSQIEVSWH PLSRRVALRA GQVLFEVSPA RYRPFVVSAG STDVRVLGTR FNVRRLDDDV RVTLERGRVE VGTSATAQAP VVLLPGQQVD AIGGQLMPLA KVDAATAMAW KDDRLVFERT PLGEAVALLR HYRKAPILLD DPSLASLRLT GVFAAHNVDR LLDLLPSILP VAVSRQEDGS VEIQRKSTRK
|
| |