Gene PA14_42100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_42100 
Symbol 
ID4381815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp3756395 
End bp3757282 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content66% 
IMG OID639325945 
Producthypothetical protein 
Protein accessionYP_791510 
Protein GI116049685 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCGCCG AGTTGTTCGC CGTGATGGCG CCCGTGCTGT TCGGCGCCGG TGTCGGTTAT 
GTCTGGGTCC GTCTCGGACA CGCCTATCCG ACCGAGTTCG TTTCGCGCAT CGTGTTCAAC
ATCGGTTCGC CATGCCTGAT CCTCGCCACC CTGGCGCATA CCCGGGTGGA CCTGCACAGC
TTCGGCCGGA TGGCCCTGGC CAGCGCGCTG ATCTGCGTCT GCATGGCTGC GCTGGGCTGG
GCGGCGGCGC GCCTCGGGCG CCAGGAGTGG CAGGTGCTGG TGCCGGCCTA CAGCTTCCCG
AATGTCGGCA ACATGGGCCT GCCGGTGTGC CTGTATGCGT TCGGCGAGGC GGGGATGACC
CTGGCGGTGG CGTTCTACCT GATCATGTCG ATCGGCAACT TCAGCCTCGG CGTGTTCTGG
ATGAGCGGCG AGCGCTCCTG GCGCTCGCTG CTGGGCAATC CGATCCTGCT CAGCGTGTTG
CTGGCCTTGT TGTTGATGGG GCTCGACCTG CAACTGCCGC GCTGGATGGC GAATACCGTC
GACCTGATGG CCGGGCTGAC CATTCCGCTG ATGCTGATCA CCCTCGGCGT GTCCCTGGCC
AGCATCCGTC CGCGGCAACT GGGCAATGGC TTCTTCTATG GCGGCCTGCG TCTTCTGCTG
GGCGCGCTGG TGGGCTGGTC GGTGGCGCTG GCGTTGCAAT TGCCGCCGCT GGCGCAGGGG
GTGCTGGTGG TGCAATCGTC GATGCCGGTG GCGGTGTTCA ACTATCTCTA CGCCTTGCGC
GGCAATCGTT CGCCGGATCA GGTCGCCAGC CTGGTGCTGT GTTCGACCCT GCTGTCGTTC
GCCTTCATTC CGCTGCTGCT GACCTGGTGG CTGCCTGCGC TGCGCTGA
 
Protein sequence
MLAELFAVMA PVLFGAGVGY VWVRLGHAYP TEFVSRIVFN IGSPCLILAT LAHTRVDLHS 
FGRMALASAL ICVCMAALGW AAARLGRQEW QVLVPAYSFP NVGNMGLPVC LYAFGEAGMT
LAVAFYLIMS IGNFSLGVFW MSGERSWRSL LGNPILLSVL LALLLMGLDL QLPRWMANTV
DLMAGLTIPL MLITLGVSLA SIRPRQLGNG FFYGGLRLLL GALVGWSVAL ALQLPPLAQG
VLVVQSSMPV AVFNYLYALR GNRSPDQVAS LVLCSTLLSF AFIPLLLTWW LPALR