Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_39480 |
Symbol | |
ID | 4385137 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 3513093 |
End bp | 3515246 |
Gene Length | 2154 bp |
Protein Length | 717 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639325733 |
Product | hypothetical protein |
Protein accession | YP_791302 |
Protein GI | 116049889 |
COG category | [S] Function unknown |
COG ID | [COG4694] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000519045 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGAAA AAATTCTGCT TCGCAACGTC TCCAGCTACT CTCCAGACTC AGCGGTATCC ATTGCCCCGC TTAAGCGCGT GAGTTTGTTC TATGGCCATA ACGGGACGGG CAAGACCACT ATCAGTAACT TCCTTCAGGC CCCTGATGAG GCCTGCTACA GCGTTTGCGG CGTGGAGCCA GTAAAGGTTG GCCGGGAGAT CCTAGTCTAC AACCATGCAT TCATGGAGAA AAATTTCCAT GAAGCCGCAT CCCAGCCAGG GGTCTTCACC CTCAATGAGG GCAACATTGA GGCGGAAGCT GCCCTCGCAG TGGCCGAGAA AGCAATCGCT GAGCTGACGA TCGCCCATGA TACTGAAATG GAGAAGGGCA TTAACTGCAA GAATGCTCAG CAGCAAGCTC ATGAGGCGCT ACTGGACAGT GTATGGAAGC CTAAGCGTGG CTTCGATAAC ACCGCTTTGG CTTACTGCTT CAGGTCGCTC AACACCAAAG AGCGTTTACT TGATGCAGTC CGAAGCGTCC AGCTTGTGGC AACCTCTGAC ACCGCTCAGG GGCTACTCAG CGAGGCGGCA GAACTTAACG AGGCCAGTGA TAAAGAGCTG CCCGGAATCG CGCCAATCAC CTTCCAGGCG GGTAAGCTAG AAACCGATCC GATCATGCAG GAAGTCATCA CTGGGTCAGG CGATTCCTAC CTTTCTGCGT TCATTCAGCA ACTGGGAAAT TCGGATTGGG TCAAGCAGGC ACTGCGCTAT GAGGTCGAGG CAAAAGACCA GTGCCCACTA TGCCAGCAGT CCTTGCCGCA GGATTTCTAT ACTGAAATTC GTAAAGTCTT CGATAAAACC TATCAGCAGC GCATTGATTT GCTGCAGCAA TTCGAAAGCC AATACCGAGA CGCGGTGGAT CAATTTCTGC GACGGTACGA GGCTCCGGAA TATCAGCTGC AAGCCATAAA GCTCCGTGTC ACCAGACTTC ACGCTGTCTT CCAGAAAAAC CTGCAATCCC TCGCTACAAA GCTCGCCAGT CCATCCCTTA TGATTACGTT GGAGTCCACT GCAACATTGG TCGCAGAGTT GAACAGTGAG ATCGCGGCTG AGCAACTGAA AATCGACGCT ATCAATGCGA GGATAAAAAA CAGGAAGCAG CATGAGGAGG ACATCAAGCG ACGCTTCTGG AGCTGGTACA GAGCTTCGTG CGACGCGGCT TTCGTGGCAT TCGAAAAGGT CGATAAGGAG CAGGGGCGCC AACGCCAGGC CGCCAAGGAT GAGGTTCAGT CTCTGCGGGA TCGCATTCAG GCACAACGCG ATATCATTGC CCAATCCAGG GCGGCCATCA GGAACATCGA CCAGTCGGTC GAGAGTATCA ATAATTGGTT GCGGGTGTTG GGTCTGAAGG GCTTCGCGCT GATTAAAGAA GAGGGCCCGG TGCCACAATA TCGTCTTGAA CGTCCTGGCC AGACTGAAGG GGTGTTCAGA ACGCTAAGTG AGGGCGAAAA AACGCTGATC TCGTTCCTCT ACTTCCTTGA GGTCTGCAAT GGCGAGCTGG ACACAGCTAG TGGGACGCTC AAGCGTGATC GCATCATCGT CATCGATGAC CCAATATCGA GCCTCTCCCA TAACTATGTC TACGATATTG CGTCGCTGAT CAGGCGGCAG GTGCTCATCC CGAGAGACCG GTTCAAACAG GTGATCATTC TGACGCACAA CCTTTTCTTC TTCCACGAAA TGGTCAAGCT CTTGAAGGAT GACGGAGAAA AATCCTTGGC AATGTTCCGG ATCACCAAGT CCGAATACAG CTCGGTCGTG ACCATGGAAG AGCGCGAAAT CCAGAACGAC TACCAAGCCT TCTGGCAAAC CATCAAGGAC GCGTTGCAAG GCCGAACTTC CCCTAACGTG ATCCCGAACA TGATGCGCAA TATCTTGGAG TACTACTTCA GCTTCGTGCA TCAGACGCAA AGCCTGCGCC AAGCGTTGAC TGATCTTAGC GAGGAGAATC CAGAGTTCAG AGCGCTTTAC CGATACATCA ACCGTGAATC ACATGCTGAC TCGGTTAACC TAACTGACTT CGGCGAGATC GATCCGGAGA TCTTCGTCGC GCGGTTTAAG GATGTGTTCA TCAGAACCAA TTTCGAATCT CACTTCGACA AGATGATGGC ATAG
|
Protein sequence | MIEKILLRNV SSYSPDSAVS IAPLKRVSLF YGHNGTGKTT ISNFLQAPDE ACYSVCGVEP VKVGREILVY NHAFMEKNFH EAASQPGVFT LNEGNIEAEA ALAVAEKAIA ELTIAHDTEM EKGINCKNAQ QQAHEALLDS VWKPKRGFDN TALAYCFRSL NTKERLLDAV RSVQLVATSD TAQGLLSEAA ELNEASDKEL PGIAPITFQA GKLETDPIMQ EVITGSGDSY LSAFIQQLGN SDWVKQALRY EVEAKDQCPL CQQSLPQDFY TEIRKVFDKT YQQRIDLLQQ FESQYRDAVD QFLRRYEAPE YQLQAIKLRV TRLHAVFQKN LQSLATKLAS PSLMITLEST ATLVAELNSE IAAEQLKIDA INARIKNRKQ HEEDIKRRFW SWYRASCDAA FVAFEKVDKE QGRQRQAAKD EVQSLRDRIQ AQRDIIAQSR AAIRNIDQSV ESINNWLRVL GLKGFALIKE EGPVPQYRLE RPGQTEGVFR TLSEGEKTLI SFLYFLEVCN GELDTASGTL KRDRIIVIDD PISSLSHNYV YDIASLIRRQ VLIPRDRFKQ VIILTHNLFF FHEMVKLLKD DGEKSLAMFR ITKSEYSSVV TMEEREIQND YQAFWQTIKD ALQGRTSPNV IPNMMRNILE YYFSFVHQTQ SLRQALTDLS EENPEFRALY RYINRESHAD SVNLTDFGEI DPEIFVARFK DVFIRTNFES HFDKMMA
|
| |