Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_37490 |
Symbol | |
ID | 4385783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3335723 |
End bp | 3338374 |
Gene Length | 2652 bp |
Protein Length | 883 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639325581 |
Product | putative TonB-dependent receptor |
Protein accession | YP_791150 |
Protein GI | 116050036 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0134389 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAACC CGCGTTCGCC ACGTCTTCGA CTCGTCCCCG TGCTCTGCGC GGTCGGCCTG GCCTGCCTTG GCCAGCCCGG CGAGTCGGCG GCAGAGGAGG TCCGCGCCAC CAGCCGCGCC GAGATCCAGC GCTTCGACAT CCCGGCCGGC GAACTGGCCC AGGTACTGCT GAGCATCGTC CGCCAGAGTC GCACCCCGAT CGCCTTCGAC CAGCACCTGG TGGAGGGCCT GCCGGCACCG GCGATCCAGG GCTCCTACAG CGTCGAGCAG GCGCTGCAGC GGGCCTTGCG GGGCAGCGGC CTGGAATACA GCCGCAGCGC CGCCGGCGTG CTCAGCCTGC AACGCGCCAC GGCGCCGGAT GCCGCGCTGC CGGCGGCGAA GCCCGCCGGG ACCCTGGCCA CGGTGGTGGT CACCGGCACC CGCAAGGCCG ATGTCAAGGC CGGCGAGAGC CTGGCACCGA TCGATGTGGT CAGCGCCGAG CAATTGCGCG ACAGTGGCAG CGGCGACCTG CGCGACGCCC TGGTGCGCCT GCTGCCCTCG CTGTCGCGCC AGGCCCAGGC CTACAACGCT TCGGCGCTGA CCAACGCGCA GTCGCTGCGC GGCCTGAGTC CCAACCACGT GCTGGTGCTG GTGAACGGCA AGCGCCGCCA CGAGACCGCC AACATCAATG TCAGCGGCGG GCTGCAGAGC GGCTCCACCG GGGTCGACCT GGACACCATC CCGCTCGCCG CCATCGAGCG CATCGAGGTG CTGCGCGACG GCGCCTCGGC GCAGTACGGC TCGGACGCCA TCGCCGGGGT GATCAACGTC ATCCTCAAGT CGGCCGACCA CGGCGGCCGG CTCGCCTACG ACAACGGTCG CTACGGCGAT GGCGACGGCC TGACCCAGAA CGGCGGGGTG AATGGCGGCC TGCGTTTCGG CGAGAGCGGT TTCCTCAACC TCAGCGCGCA GTTCCGCGAA CAGGCGCGGA CCATCCGCGC CGGCATCGAC CAGCGTACCG GGCACTACGG CAACCCGTCC ATCGGCGACC CTTCGCTGCA CCGCCAGGCG CTGGCCTACA ACGCCGGCGT GGCGCTGGAC GACAACGTCG AGCTGTACAG CTTCGCCACC TATACCCATC GCTCGGTGTC CTCGGCGCAG ATCTACCAGT TGCCGTCCCT GGCGCCGCGA CTCTATCCGA ACGGCTTCAC CCCGCGCATC ACCAGCGACG AGGACGACTA TTCGCTGACC CTCGGCGCCC GTGGCGGCGA GCTGTTCGGC GCCTGGGACT GGGACCTCAG TTCCACCTAC GGTGCCGACC GCCCGGAGAT CGGCATGGAC CATTCGATCA ACCTCGCCCT CTACGGCGAG ACCGGCGATT CGCCGCGGTC CTTCGACCTG GCGCGCTACA AGGCCACCCA GTGGACCAAC AATCTCGACC TGCGCCGCGA CTTCGACCTC GCCTGGCTGC CCGCGCCGCT GAATTTCTCC TGGGGCCTGG AGCAGCGCCG CGAGCTCTAC GAGGTCGAGG CCGGCGATCC CTGGTCCTAC TACAACGGCG GTTCCAAGGC GCTCCCCGGA CAGGCGCCGG CCAGCGCCGG ACAGTGGAGC CGCGACGTGC TCGGCGCCTA TCTCGACCTG TCCACCGCCC TCGACGAGCG CTGGCAACTG GAGACGGCGG CGCGCTACGA GCACTACAGC GACTTCGGCA GCACCACCAA CGGCAAGCTC GCCAGCCGCT ACCGCTTCAG CCCCGAGGTG TCGGCGCGGG CCAGTCTCAG CAGCGGCTTC CGCGCGCCGT CGCTGGCCCA GGAGAACTAC ACCAGCCTGG GCGTCTCGCC GACCATCGCC AGCGGCCTGC TGGCGGTCAA CTCGCCGGCG GCCAGGCTGC TCGGCGCCGA AGACCTGGAG CCGGAAAAGT CGATCAGCTA CAACCTCGGC CTGGTGCTCG ATCCCTTGCC GGACCTGAAC CTGGCCATCG ACACCTATCG CATCGAGATC CGCGACCGCA TCGTCGACGG TGCCACCTAT TCCGGACAGC CGGCGATCGA TGCGCTGCGC GCCGGCGGGA TCAGCATCCC GGCCGGACTG ACCCAGGTCA GCACCCACTA CATGACCAAC GGCGCCGACA CCCGTACCCA CGGCCTCGAC CTCACCGCCA GCTACCTGAC CCGGCTCGGC GAGTGGGGCC GGATCGACTG GCGCCTGGGC GCCAACGTCA ATCGCACGAA GCTGGTCAGG AATCATCGCG GGCGCAACGG CCAGCCGCTG CTCAACGACC AGCAGCAGGC CTGGATCACC AGCTCCACGC CGCGCAGCCA GGTCAGCCTG CAGGCCGACT GGAGCTACCG GCGCTGGGGG CTGACCCTGC GCGAAACGCG CTACAGCAAG ACGGTTTCCG AACTGGACTA CTACACCGGC GAGCATGCCT ATTCGACCAC GGTCTTCAAC CGCTTCGAGA ACTCGCCCAA GTACATCACC GACGTCGCCC TGCGCTATGC GGCGAGCCGC AACCTGACCC TGAGCGCCGG GGCCAACAAT CTGTTCGACG TGAAGCCCGA CAAGCTGCCG GCCGAGAGCG CCTACCTCGG CTTCAACCAG TACGACACCT ATGCCTCGCA GATCAGCTTC AACGGCGCCT TCTACTACCT CGGCGCGGCC TACACCTTCT AA
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Protein sequence | MPNPRSPRLR LVPVLCAVGL ACLGQPGESA AEEVRATSRA EIQRFDIPAG ELAQVLLSIV RQSRTPIAFD QHLVEGLPAP AIQGSYSVEQ ALQRALRGSG LEYSRSAAGV LSLQRATAPD AALPAAKPAG TLATVVVTGT RKADVKAGES LAPIDVVSAE QLRDSGSGDL RDALVRLLPS LSRQAQAYNA SALTNAQSLR GLSPNHVLVL VNGKRRHETA NINVSGGLQS GSTGVDLDTI PLAAIERIEV LRDGASAQYG SDAIAGVINV ILKSADHGGR LAYDNGRYGD GDGLTQNGGV NGGLRFGESG FLNLSAQFRE QARTIRAGID QRTGHYGNPS IGDPSLHRQA LAYNAGVALD DNVELYSFAT YTHRSVSSAQ IYQLPSLAPR LYPNGFTPRI TSDEDDYSLT LGARGGELFG AWDWDLSSTY GADRPEIGMD HSINLALYGE TGDSPRSFDL ARYKATQWTN NLDLRRDFDL AWLPAPLNFS WGLEQRRELY EVEAGDPWSY YNGGSKALPG QAPASAGQWS RDVLGAYLDL STALDERWQL ETAARYEHYS DFGSTTNGKL ASRYRFSPEV SARASLSSGF RAPSLAQENY TSLGVSPTIA SGLLAVNSPA ARLLGAEDLE PEKSISYNLG LVLDPLPDLN LAIDTYRIEI RDRIVDGATY SGQPAIDALR AGGISIPAGL TQVSTHYMTN GADTRTHGLD LTASYLTRLG EWGRIDWRLG ANVNRTKLVR NHRGRNGQPL LNDQQQAWIT SSTPRSQVSL QADWSYRRWG LTLRETRYSK TVSELDYYTG EHAYSTTVFN RFENSPKYIT DVALRYAASR NLTLSAGANN LFDVKPDKLP AESAYLGFNQ YDTYASQISF NGAFYYLGAA YTF
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