Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_35810 |
Symbol | |
ID | 4381403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 3186337 |
End bp | 3187047 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639325444 |
Product | hypothetical protein |
Protein accession | YP_791013 |
Protein GI | 116050170 |
COG category | [S] Function unknown |
COG ID | [COG4422] Bacteriophage protein gp37 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000000167759 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 3.3273e-20 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGACCTGGA ACCCGGTGGT GGGTTGCACC AAGGTGTCGC CGGGCTGCAA ACACTGCTAT GCCGAGAACA TGGCGCGTCG CTTGCAGGCC ATGGGCACGC CCGGCTACGA GAACGGCTTT CGCCTCAGCC TGCGCCCAGA GAAACTGCAG GAGCCTCTGC AGCGCAAGAA GCCGACCATC TACTTTGTCA ATTCCATGTC TGACCTGTTC CATGAGCAGG TGCCGGACAC CTACATCGAC CAGGTGTTCG CGGTTATCCA CCAGGCCTCA CAGCACACCT TCCAGATCCT CACTAAGCGG GCCGAGCGCC TGGCCGACTA TTTCAGCCAG CGCACACCGC CGGCCAACGC TTGGCTGGGG GTCTCGGTCG AGGACCGGGA GTACGGCGTG CCCAGAATCG ACTGCCTGCG TGGCATCAAC GCCGCGATCC GTTTCCTCTC CGCGGAACCC TTACTAGAAG ACTTGGGTGA ACTGAACCTG ACTGACATCC ATTGGGTCAT CGTCGGCGGC GAGTCCGGCG CCAAGGCCCG GCCAATGAAG CAGGAGTGGG TGGATAACAT CCACCGCCAG TGCGATGCCT TTGGCGCTGC TTTCTTTTTC AAACAATGGG GCGGCTGGGG CTCCGATGGC GTGAAGCGTT CAAAGAAAGC TAATGGCCGG CTGCTGAAGG GCCAGACCTG GGATGAAATT CCGCTGCTGA CCCTCGCCTG A
|
Protein sequence | MTWNPVVGCT KVSPGCKHCY AENMARRLQA MGTPGYENGF RLSLRPEKLQ EPLQRKKPTI YFVNSMSDLF HEQVPDTYID QVFAVIHQAS QHTFQILTKR AERLADYFSQ RTPPANAWLG VSVEDREYGV PRIDCLRGIN AAIRFLSAEP LLEDLGELNL TDIHWVIVGG ESGAKARPMK QEWVDNIHRQ CDAFGAAFFF KQWGGWGSDG VKRSKKANGR LLKGQTWDEI PLLTLA
|
| |