Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_31560 |
Symbol | |
ID | 4381455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 2743301 |
End bp | 2744233 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639325117 |
Product | LysR family transcriptional regulator |
Protein accession | YP_790686 |
Protein GI | 116050495 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.574653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.00349034 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCTGA ACAAAGTCGA CCTGAACCTG TTCATCGTGT TCGATGCGAT CTATACCGAA GCCAACCTGA CCCGCGCCGG GCAAATCGTC GGCATCACCC AGCCAGCCGT ATCCAACGCC CTTTCCCGCC TGCGCGAGAC CTTCAACGAC CCGCTGTTCG TGCGCACCGC CCAGGGCATG GTGCCGACCC CGATGGCGCA GAACATCATC GGCCCGGTGC GCAACGCGCT GCAGTTGCTG CGGGTTTCGG TGCAGGAGAG CCGCAGCTTC GATCCGCAGC AGGCGAACAA GACCTACCGC ATCAGCATGA CCGACCTCAC CGAAGCGGTC ATCCTCCCCC CGCTGTTCCA GCGCTTGCGC CGCCTGGCGC CGAACGTGCA TATCGAGAGC TTCCTCGCCA AGCGCCGCGA AACCACCAAG GAACTCGCCG CCGGCCGCCT CGACTTCGCC GTCGACGCGC CGCTGAACAC CGATCCCCAG GTGCGCCACG TCAAGCTGAT GGAGGACCGC TACGTCTGCG CCATGCGCCG CGGCCACCCA CTGGCGGGCA AGCCGAAGCT GGCCCTGGAC GATTACCTGG GCCTGACCCA CATCCATATT TCCAGCCGCC GCAGCGGCCT CGGCTACATC GACCTGGCGC TGGGCAAGAT GGGCATCCAG CGCAAGATCG CGCTGCGCTC GCAGCACTAC CTGATGGCCT CCACGGTGGT CCAGCAGACC GACATGGCGA TGACCGTGCC GGAACGCTTC GCCCGTCACC ACGACCTGCA CTACGCGGAG CTGCCGGTGA GCGACGTGCC GAAACTGGAA ACCCACCTGT ACTGGCACGA AAGCACCGAC CAGGACCCGG CCAACCGCTG GATGCGCGAA CAGATCATCG AGCTGTGCCA GCAGGTCACC GCGCGCGAGA ACAAGGCGGC GCAGCCGGCG TGA
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Protein sequence | MNLNKVDLNL FIVFDAIYTE ANLTRAGQIV GITQPAVSNA LSRLRETFND PLFVRTAQGM VPTPMAQNII GPVRNALQLL RVSVQESRSF DPQQANKTYR ISMTDLTEAV ILPPLFQRLR RLAPNVHIES FLAKRRETTK ELAAGRLDFA VDAPLNTDPQ VRHVKLMEDR YVCAMRRGHP LAGKPKLALD DYLGLTHIHI SSRRSGLGYI DLALGKMGIQ RKIALRSQHY LMASTVVQQT DMAMTVPERF ARHHDLHYAE LPVSDVPKLE THLYWHESTD QDPANRWMRE QIIELCQQVT ARENKAAQPA
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