Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_22580 |
Symbol | |
ID | 4383119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | - |
Start bp | 1964106 |
End bp | 1964870 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639324374 |
Product | AraC family transcriptional regulator |
Protein accession | YP_789959 |
Protein GI | 116051210 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.000567306 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.000118862 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTTCGA TCCTTTCCCT GCGCCACTAC AGCCACGACC AGATCGTCCA CAGCCATGAC CATGCCCAAT TGGTCCTGGG CCTCAGCGGC TGCCTCGAGT TCGAGGTCGA GGGGCGCGGC AGCCGCGTGT TGCGGCAGAC CTTCGCGGTG GTGCCGGCGC AAGCCCGGCA TGCCTGCTCG AGTCCCGCCG GCAGCCGCTG CCTGGTCCTC GACCTGCCCT GCGACGGCAG CCTGCTGCTG GGCCTGGGCG AACACGCCGA AGCCGGCAGG CGGCTGTTCG AGCGACCGCA GGCGCTGTCG CTGACACCCG CCCAGGGCCA ACTGGTGAAC TGGCTGGCCA GCGGCCCGAT CAACGACCCG GTGATCGCCC ACCAGGGCGC CGGCCTGCTC CTCGCCAGCC TGGCCAGCGA GCGCCAGCCG CCGCGCCAGC AGCCCCGCCT GCCACTGGCC AGCCTGGACG CCTACCTCGA CCGCCATGCC GCCCATCCGC TACAGGTAGC CGACCTGGCG CGGCTGGCCG GTCTTTCGGT GGCGCGCTTC CACAGCCTGT TCCTCGCCGA GACCGGACAG ACGCCCATGG ACTACGCGCG CAGCCGACGC CTGCACCAGG CCCACGAACT GTTGTTGGAG AGCAGCCTGG CGGTGGGCGA GATCGCCGCC CGGGTCGGCT ACGCCTCGCA GAGCGCCTTC ACCGCAGCGC TGGTCCGCGA GTTCGGCGTC ACCCCGCGAC AACTGCGTCG CGAGTCCCGC GACAAAACCG GCTAG
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Protein sequence | MGSILSLRHY SHDQIVHSHD HAQLVLGLSG CLEFEVEGRG SRVLRQTFAV VPAQARHACS SPAGSRCLVL DLPCDGSLLL GLGEHAEAGR RLFERPQALS LTPAQGQLVN WLASGPINDP VIAHQGAGLL LASLASERQP PRQQPRLPLA SLDAYLDRHA AHPLQVADLA RLAGLSVARF HSLFLAETGQ TPMDYARSRR LHQAHELLLE SSLAVGEIAA RVGYASQSAF TAALVREFGV TPRQLRRESR DKTG
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