Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_21970 |
Symbol | |
ID | 4381247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 1910972 |
End bp | 1911688 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639324321 |
Product | transcriptional regulator |
Protein accession | YP_789906 |
Protein GI | 116051262 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00000000109552 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTGACG AAGCGCTACC CACCGTAACG GCGATCTGCC GGGCGCTCAG CGAGCAGATC GGCCATGGTC TGCTGCCGGC GGGTGGCAAG CTGCCGGCCG AGCGCAAGCT CAGCGAGCTG TTCGCGACGA CCCGGATCAC CCTGCGCGAG GCGCTGATCC AGCTGGAGTC GCAGGGCCTG ATCTACCGCG AGGAGCGCCG CGGCTGGTTC GTCTCCCCCG AGCGGCTGGC CTATAACCCG CTGGTCCGCA GCCACTTCCA TGCGATGGTC AGCGAACAGG GCCGGGTGCC GGCGACCGAG GTTCTGTCGG CCCGGCAGAT GCCGGCGAGC GCGGCGGTCT GCGAGCTGCT GGAGCTGCCG GCGCTGTCCA GCGTCTACCA GATCCGCCGG GCGCGGCGGG TGGACGGGCG GCTGGTGCTG TATGTCGAGC ACTACCTGAA CGCGCAGTAC TTCCCCGGAA TCCTCGGCCA CGACCTGACC CGCTCGCTGA CCGAACTCTA TGCCAGCGAG TACGGCATCC ACTATGGGCG GGTGCGTTTC GACATGGTGC CCACTGCACT GCATGCCGAG GCTGCGGCGC CGCTGAAGGT GGCGGTGGGC AGCCCGGCCC TGCGCATCAG CCGGATCAAC CGCGACCAGC GTGGTCGGCT GATCGACTGC GACCTGGAGT TCTGGCGCCA CGACGCCATC CATATCAGCG TCGAGGTACC GCAGTAA
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Protein sequence | MRDEALPTVT AICRALSEQI GHGLLPAGGK LPAERKLSEL FATTRITLRE ALIQLESQGL IYREERRGWF VSPERLAYNP LVRSHFHAMV SEQGRVPATE VLSARQMPAS AAVCELLELP ALSSVYQIRR ARRVDGRLVL YVEHYLNAQY FPGILGHDLT RSLTELYASE YGIHYGRVRF DMVPTALHAE AAAPLKVAVG SPALRISRIN RDQRGRLIDC DLEFWRHDAI HISVEVPQ
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