| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PA14_18330 |
|---|
| Symbol | arnT |
|---|
| ID | 4381520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008463 |
|---|
| Strand | - |
|---|
| Start bp | 1571590 |
|---|
| End bp | 1573239 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639324021 |
|---|
| Product | 4-amino-4-deoxy-L-arabinose transferase |
|---|
| Protein accession | YP_789609 |
|---|
| Protein GI | 116051554 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0521799 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCC GCCAGACCTG GTCGCTGCTG CTGATCGCCT TCGGCCTGTT CTACCTGGTT
CCATTGAGCA ACCATGGCCT GTGGATTCCC GACGAGACCC GCTACGCGCA GATCAGCCAG
GCGATGCTGC TGGGCGGCGA CTGGGTGTCG CCGCACTTCC TCGGCCTGCG CTACTTCGAG
AAGCCGGTCG CCGGCTACTG GATGATCGCC CTCGGCCAGG CGGTCTTCGG CGAAAACCTG
TTCGGCGTGC GCATCGCCTC GGTCGTCGCC ACCGCCCTCA GCGTCCTGCT CGCCTACCTG
CTGGCCCGCC GCCTGTGGCG CGACCCGCGC ACCAGCCTGG CGTGCGCGCT GCTCTACGCC
AGCTTCGGCT TGATCGCCGG GCAGTCCGGC TATGCCAACC TCGACCCGCA ATTCACCTTC
TGGGTCAACC TGAGCCTGGT GGCGCTGTGG TACGCCCTCG ACGCGGGGAG CCGCCGCGCG
CGCCTGCTCG GCTGGATCCT GCTCGGCCTC GCCTGCGGCA TGGGCTTCCT GACCAAGGGC
TTCCTCGCCT GGCTGCTGCC GGTGCTGGTC GCCCTGCCCT ACATGCTCTG GCAGCGGCGC
TGGCGCGAGC TGCTTGGCTA CGGCGCGCTG GCGGTGCTGG CGGCGCTGCT CGTCTGCCTG
CCCTGGGCGC TCGCCGTGCA TGCGCGGGAA GCGGACTACT GGCGGTTCTT CTTCTGGCAC
GAACACATCC GCCGCTTCGC CGGCGAAGAC GCCCAGCACT CTCGCCCGTG GTGGTTCTAC
CTGCCGTTGC TGGTGGTCGC CTGCCTGCCC TGGAGCGGCC TGCTGCCGAG CGCTCTGCGC
CAGGCCTGGC ACGAGCGGCG CCAGGCGCCG GTGGTCTTCC TGGCGCTATG GCTGCTGTTG
CCGCTGGCGT TCTTCAGCCT GAGCCGGGGC AAGCTGCCGA CCTACATCAT GCCCTGCCTG
CTGCCGCTGG CACTGCTCAT GGGCCACGCC CTGGTGCAGC GGCTGCGCCT GGGGAACAGC
GTCGCGCTGC GCGGCAACGG GCTGCTCAAC CTGGGCCTGG CGCTCCTCGC GCTGGCGGCC
CTGGCCTACC TGCAACTGCG CAAGCCGGTG TACCAGGAAG AACCCTTCGA GCTGTTCCTG
GTCCTGCTGG TGATCGGCGC CTGGGCCGCC GCCGGCCTCG CCCAGTGGCG CTACCCGCTA
CGCGCCTGGG CCGCGCCGCT GCTGGCGAGC TGGGTGCTGA TCGCGCTGCT GCCGGCAGCG
ATGCCCAACC ATGTGGTGCA GAACAAGACC CCCGACCTGT TCGTCGCCGA ACACCTCGAC
GAACTGACCG GCGCCCGCCA TCTGCTGAGC AACGACCTCG GCGCCGCCTC GGCCCTCGCC
TGGCGCCTGC GTCGTAGCGA CGTGACGCTC TACGACACGC GCGGCGAGCT GAAGTACGGC
CTCTCCTACC CCGAGCACAG CCAGCGCAGC GTGCCCTTGG CAGACATCCG CCAGTGGCTC
TGGCGGGCAC GCCAGGACGG CTCGGTTGCC GTGCTGCTGC GGATCAACAG CGCCAGCGAC
CGCTACCAGC TGGCGCTGTT GCCGGGCGAC GGCGAACGCT ACCGGAACGG CAACCTGGTC
CTGGCGATCC TGCCGCAGGT GCGCCCATGA
|
|---|
| Protein sequence | MSRRQTWSLL LIAFGLFYLV PLSNHGLWIP DETRYAQISQ AMLLGGDWVS PHFLGLRYFE
KPVAGYWMIA LGQAVFGENL FGVRIASVVA TALSVLLAYL LARRLWRDPR TSLACALLYA
SFGLIAGQSG YANLDPQFTF WVNLSLVALW YALDAGSRRA RLLGWILLGL ACGMGFLTKG
FLAWLLPVLV ALPYMLWQRR WRELLGYGAL AVLAALLVCL PWALAVHARE ADYWRFFFWH
EHIRRFAGED AQHSRPWWFY LPLLVVACLP WSGLLPSALR QAWHERRQAP VVFLALWLLL
PLAFFSLSRG KLPTYIMPCL LPLALLMGHA LVQRLRLGNS VALRGNGLLN LGLALLALAA
LAYLQLRKPV YQEEPFELFL VLLVIGAWAA AGLAQWRYPL RAWAAPLLAS WVLIALLPAA
MPNHVVQNKT PDLFVAEHLD ELTGARHLLS NDLGAASALA WRLRRSDVTL YDTRGELKYG
LSYPEHSQRS VPLADIRQWL WRARQDGSVA VLLRINSASD RYQLALLPGD GERYRNGNLV
LAILPQVRP
|
|---|
| |