Gene PA14_08270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_08270 
Symbol 
ID4383968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand
Start bp706286 
End bp707056 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content69% 
IMG OID639323215 
Producthypothetical protein 
Protein accessionYP_788813 
Protein GI116054368 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0000264439 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACTGA GCCGCAGCTT GCAGCGGGCC ATCGCCGCAC ACGCCGCCCG CGAGCATCCG 
CGCGAATGCT GCGGGCTGAT CGTTCGCGGT GTGCGTCAAC GCCGCTACGT GGCCTGTCGC
AACGCAGCCG GATCGCCCAG CGAGCACTTC GTGATCGATC ACCAGGACTG GTGCGCTGCC
GAGGACCAGG GCGAGGTCCT GGCCATCGTC CACAGCCACC CGGACGTTCC GGCCACGCCG
AGCATGGCCG ATCGGGTCAG TTGCGAACTG CATGGTCTGC CCTGGGTGAT CCTGTCCTGG
CCGGAAGGCG ATGTCGCGCA TCTAGCGCCG GAGGGCTATC GGGCGCCGCT GCTCGGCCGC
GAGTTCGCCC ACGGCGTGCT CGACTGCTGG AGCCTCTGTC GCGACTGGTA CCGCCGCGAG
GCAGGTCTGG AGCTTCCGGA CTATCCGCGC CGCGACGGTT GGTGGGAAAC CGGCGAGAGC
CTCTACGAGC AGCACTATGC GGCGGCTGGA TTCCGGCCGG TGCCGCTGGC CGGAATCCGC
CGCGGCGACA TGCTGGTGAT GCAGGTCGGA AGGGCGCTGC ACCCTAACCA TGCGGGCATC
TACCTGGGCA ACGACTGGCG TCTGGACAGC GAGCCGGTCC AGGCGCTCGG CGGCGACGGA
CCGTTCCTGC TGCACCACCT GTACGGACGG CTGTCGACCC GCGACGTGTT CGGCGGACCC
TGGATCGAAC GCACGCGCCT GGTCTTGCGG CACATGCGGA TGCCGCAGTG A
 
Protein sequence
MELSRSLQRA IAAHAAREHP RECCGLIVRG VRQRRYVACR NAAGSPSEHF VIDHQDWCAA 
EDQGEVLAIV HSHPDVPATP SMADRVSCEL HGLPWVILSW PEGDVAHLAP EGYRAPLLGR
EFAHGVLDCW SLCRDWYRRE AGLELPDYPR RDGWWETGES LYEQHYAAAG FRPVPLAGIR
RGDMLVMQVG RALHPNHAGI YLGNDWRLDS EPVQALGGDG PFLLHHLYGR LSTRDVFGGP
WIERTRLVLR HMRMPQ