Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PA14_08270 |
Symbol | |
ID | 4383968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas aeruginosa UCBPP-PA14 |
Kingdom | Bacteria |
Replicon accession | NC_008463 |
Strand | + |
Start bp | 706286 |
End bp | 707056 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639323215 |
Product | hypothetical protein |
Protein accession | YP_788813 |
Protein GI | 116054368 |
COG category | [R] General function prediction only |
COG ID | [COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0000264439 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGAACTGA GCCGCAGCTT GCAGCGGGCC ATCGCCGCAC ACGCCGCCCG CGAGCATCCG CGCGAATGCT GCGGGCTGAT CGTTCGCGGT GTGCGTCAAC GCCGCTACGT GGCCTGTCGC AACGCAGCCG GATCGCCCAG CGAGCACTTC GTGATCGATC ACCAGGACTG GTGCGCTGCC GAGGACCAGG GCGAGGTCCT GGCCATCGTC CACAGCCACC CGGACGTTCC GGCCACGCCG AGCATGGCCG ATCGGGTCAG TTGCGAACTG CATGGTCTGC CCTGGGTGAT CCTGTCCTGG CCGGAAGGCG ATGTCGCGCA TCTAGCGCCG GAGGGCTATC GGGCGCCGCT GCTCGGCCGC GAGTTCGCCC ACGGCGTGCT CGACTGCTGG AGCCTCTGTC GCGACTGGTA CCGCCGCGAG GCAGGTCTGG AGCTTCCGGA CTATCCGCGC CGCGACGGTT GGTGGGAAAC CGGCGAGAGC CTCTACGAGC AGCACTATGC GGCGGCTGGA TTCCGGCCGG TGCCGCTGGC CGGAATCCGC CGCGGCGACA TGCTGGTGAT GCAGGTCGGA AGGGCGCTGC ACCCTAACCA TGCGGGCATC TACCTGGGCA ACGACTGGCG TCTGGACAGC GAGCCGGTCC AGGCGCTCGG CGGCGACGGA CCGTTCCTGC TGCACCACCT GTACGGACGG CTGTCGACCC GCGACGTGTT CGGCGGACCC TGGATCGAAC GCACGCGCCT GGTCTTGCGG CACATGCGGA TGCCGCAGTG A
|
Protein sequence | MELSRSLQRA IAAHAAREHP RECCGLIVRG VRQRRYVACR NAAGSPSEHF VIDHQDWCAA EDQGEVLAIV HSHPDVPATP SMADRVSCEL HGLPWVILSW PEGDVAHLAP EGYRAPLLGR EFAHGVLDCW SLCRDWYRRE AGLELPDYPR RDGWWETGES LYEQHYAAAG FRPVPLAGIR RGDMLVMQVG RALHPNHAGI YLGNDWRLDS EPVQALGGDG PFLLHHLYGR LSTRDVFGGP WIERTRLVLR HMRMPQ
|
| |