Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_14591 |
Symbol | lpd |
ID | 4720104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 1293810 |
End bp | 1295249 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640081146 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001011773 |
Protein GI | 123966692 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.024787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACTGATT TAAATTTTGA CTTTGATTTA ATAGTAATTG GCGCAGGGTA TGGAGGGTTT GATGCAGCCA AACATGCTGC AGGCAAAGGT CTTAAAGTTG CTATCGTTGA GTCTGGAGAT ATGGGAGGCA CTTGTGTAAA TAAAGGGTGC GTGCCTTCGA AAGCTCTTTT GGCAGCAAGT GGAAAAGTTA GAGAAATAGC CAATTATGAA CATTTATCAA GGTTCGGTAT TCATGCTTCA CCTGTCAGAT TCGAAAGATC AAAGATTGCT GATCATGCTA ATAACTTAGT CTCAAATGTA AGAGAAAATT TAACAAAAAC TCTAAAAAGA AGTGGAGTTG AAATTATCTT AGGATTTGGA AGACTTGAGG GTAATCAAAA AGTAGGAGTA AGAGATAAGA ATGGAATTGA TAAGATCTTT ACATGTAAAA ATACAGTTAT TGCTTCAGGT TCTTCTCCTT TTGTACCTCC CGGAATAAAT TTAGATAATA GAACAGTTTT CACAAGTGAT GAAGCAGTTA AACTTGAATG GCTCCCAAGA TGGATAGCTA TTATTGGAAG TGGATATATA GGTTTAGAAT TCGCCGATGT ATATACTGCT CTAGGTTGTG AAGTGACCAT GATCGAGGCT TTAGAAAATA TAATGCCCAC CTTTGACCCT GATATTACAA AAATAGCTAA GAAAAATCTA ATTCAATCAA GAGATATTGA CACTAAGTCT AATGTATTTG CGACTAAGAT CACACCCGGA TGCCCCGTAA AGATAGAACT TACGGATGCA AAATCAAAGG AAATTGTTGA GAACTTAGAA GTTGATGCCG TTCTTGTGGC TACTGGCAGG AGTCCTAATA GTAAGAATCT AAATCTTGAT TCAGTTGGTA TCGAAACTGT TAAAGGTTAT ATTCCTATTG ATGATCAAAT GAGAGTGATA AATGGTAAAA AAATAATTCC TAATGTTTGG GCCGTTGGTG ATGTTACTGG TAAACTTATG CTCGCCCATA CAGCAGCAGC TCAAGGAACA ATAGCTGTTG ATAATATATG TGGAAAAAAT ATTGAGATTA ATTATGGAAG TATTCCAGCT GCAACATTTA CTCACCCTGA GATAAGTTCA GTAGGCCTAT CTGAAACTGA TGCTAAAGAA AAAGCAATTA AAGAAGATTT TACTTTAGGG GTTGTGAAAA GCTATTTTAA AGCTAATTCC AAGGCACTAG CAGAATTAGA AAGCGATGGA ATTCTTAAGT TACTTTTCAA TAAAGATAGT GGAAAAGTAT TAGGCGCGCA CATCTTTGGA ATGCATGCAG CTGATTTGAT TCAAGAAATT GCAAATGCGA TCTCTAGAAA TCAAGATGTA ATTCAGCTAG CTTCTGAAGT ACATACTCAC CCTACTCTTA GTGAAGTCGT TGAGGTCGCC TATAAACAGG CAGCTTCTCA AGTAAAGTAA
|
Protein sequence | MTDLNFDFDL IVIGAGYGGF DAAKHAAGKG LKVAIVESGD MGGTCVNKGC VPSKALLAAS GKVREIANYE HLSRFGIHAS PVRFERSKIA DHANNLVSNV RENLTKTLKR SGVEIILGFG RLEGNQKVGV RDKNGIDKIF TCKNTVIASG SSPFVPPGIN LDNRTVFTSD EAVKLEWLPR WIAIIGSGYI GLEFADVYTA LGCEVTMIEA LENIMPTFDP DITKIAKKNL IQSRDIDTKS NVFATKITPG CPVKIELTDA KSKEIVENLE VDAVLVATGR SPNSKNLNLD SVGIETVKGY IPIDDQMRVI NGKKIIPNVW AVGDVTGKLM LAHTAAAQGT IAVDNICGKN IEINYGSIPA ATFTHPEISS VGLSETDAKE KAIKEDFTLG VVKSYFKANS KALAELESDG ILKLLFNKDS GKVLGAHIFG MHAADLIQEI ANAISRNQDV IQLASEVHTH PTLSEVVEVA YKQAASQVK
|
| |