Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_26021 |
Symbol | rimM |
ID | 4778598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 2295074 |
End bp | 2295619 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640088124 |
Product | 16S rRNA-processing protein RimM |
Protein accession | YP_001018597 |
Protein GI | 124024290 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTCTC CGCCCATGAA CGGCGACGAA GACTGGCTCA CCGTGGGGAA ACTGGTGGCC GCCCAAGGAA TGCAAGGTGA ACTACGCATC AACCCCAGCA GTGACTTCCC TGAACGCTTC ACTCTTCCTG GTCAACGCTG GCTCAAAGAA CGCAATGGTG AGCCACGACC TATTGAATTG CTGACTGGAC GTCAACTACC TGGCAGGTCG CTCTATGTCG TGAAATTTGC TGGGGTGAAC AATCGCAATG CGGCCGAAGC GCTTGTAGGC CAAAACCTAC TGGTGCCTTC AAGTGATCGT CCTAGCCTGG CCGAAGGCGA GTTTCACCTG CTTGATTTGG TCGGCCTCGA AGCCCGTTTG CAAGCGGAAG GCCCTGCAAT CGGTCATGTC ATCGACCTCA CCACCGCCGG GAACGACCTC CTCGAGATCG AATTACTGGC AGGACGGCGG GTTCTGGTTC CCTTCGTAGA AGCCATCGTG CCAGAAGTGC AACTCAATCA AGGCTGGCTC CGACTCACCC CGCCTCCTGG ACTGCTAGAG CTCTAA
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Protein sequence | MLSPPMNGDE DWLTVGKLVA AQGMQGELRI NPSSDFPERF TLPGQRWLKE RNGEPRPIEL LTGRQLPGRS LYVVKFAGVN NRNAAEALVG QNLLVPSSDR PSLAEGEFHL LDLVGLEARL QAEGPAIGHV IDLTTAGNDL LEIELLAGRR VLVPFVEAIV PEVQLNQGWL RLTPPPGLLE L
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