| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_14641 |
|---|
| Symbol | |
|---|
| ID | 4777317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | - |
|---|
| Start bp | 1259803 |
|---|
| End bp | 1260885 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640086973 |
|---|
| Product | LysM motif-containing protein |
|---|
| Protein accession | YP_001017475 |
|---|
| Protein GI | 124023168 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.318084 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCCTCCA TGAACTCGCT GCCGTTGCTG ATCTCAACCA TCGCCGCGCC AGTACTTGCA
CTCGGGACAC TCAACCAACT GCCTGGTGAA GCCAGTAAAT ATCATCATCC CGCCTCCCAT
CCATTACCAC CACCTGTTCT CCCTCAGACT GATGGACAGA TATGGGTCAA AATCAACAAA
CCAGCAACGA TTAAATTCAT TGCTCATCAG CTTGGCATCT CTTGGTCTGA GATTTCAGCG
CTCAATGATC ATTCATCAGC AAACAGGCTG ATGGCCGGCA GTTGGATTGT TTTACCTGTG
TCAGCTATGG CTCGGTTGCA GCAATCCAAG TCTTTAGACA TAACAACAGT CAGCCACAAC
CAGCCGCCAG TGACCGCCCC GGCTCCACCC GCAAGCTTGG TCACAATACA AAGCGGAGAC
TCTATTGCAT CAATTGCCAA ACAGCATGGA CAAACACATC AGAGGATTCG TCAGCTAAAT
CCAGGTCTTG AATTCAATCA ACTCACAGTG GGTAGGAAAA TTCGAGTTGC CAAGGCAACG
CGTCCTCAGA AGACGACGTT AACGACAAGT CTTGGCACTA ACAACCTTCA ATCCCTATCT
CTACTCAGTA ATGGAGGTGG ATGGATAGAT CTAGGTGACA CGAACTCTTA TATTTGGCCC
ACAAAAGGTG TAATCACCTC AGGCTATGGC TGGCGTTGGG GAAGAATGCA TCAAGGTATT
GATATAGCGA ATAAGGTCAA CACACCTATC CTTTCGGCAA AAGGCGGCAT TGTTTCCTAT
GCGGGCTGGA AAGGAGCTTA CGGATATCTT GTGGAAATAG CACATGCAAA CGGGGATTCA
ACTCGTTATG CTCACAACAA TCGACTACTT GTTAAAAAAG GGCAGATCGT GCCCCAAGGA
GCCAAAATCG CAACAATGGG GAGCACAGGA CGTAGCACTG GGCCTCACCT ACACTTTGAG
ATAAGGAAGA AGAGTGGTAC AGCAATCAAT CCAGCAAACC TCCTACCATC AAAAATAGTA
ACAACAGTGC CCACTTTTCA CTATTGCTAT CATCACAAAT CCTTCCACGA ACATCATGTA
TGA
|
|---|
| Protein sequence | MASMNSLPLL ISTIAAPVLA LGTLNQLPGE ASKYHHPASH PLPPPVLPQT DGQIWVKINK
PATIKFIAHQ LGISWSEISA LNDHSSANRL MAGSWIVLPV SAMARLQQSK SLDITTVSHN
QPPVTAPAPP ASLVTIQSGD SIASIAKQHG QTHQRIRQLN PGLEFNQLTV GRKIRVAKAT
RPQKTTLTTS LGTNNLQSLS LLSNGGGWID LGDTNSYIWP TKGVITSGYG WRWGRMHQGI
DIANKVNTPI LSAKGGIVSY AGWKGAYGYL VEIAHANGDS TRYAHNNRLL VKKGQIVPQG
AKIATMGSTG RSTGPHLHFE IRKKSGTAIN PANLLPSKIV TTVPTFHYCY HHKSFHEHHV
|
|---|
| |