Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_13891 |
Symbol | |
ID | 4777984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | - |
Start bp | 1184893 |
End bp | 1186671 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640086898 |
Product | ABC transporter |
Protein accession | YP_001017401 |
Protein GI | 124023094 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.571762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTCCT CCTCCGAAGC CGGCTTCCGC AGACTGCTTC CCCTCTTACG CCCCCACCTG CGCAGGCTGA TCTGGGGAGG TGTGTGCATG CTGATTTACG TAGGATGCTG GCCACTGCTG GCATGGCTTG CTGGGCAGCT AATTCCAGCG ATCGGGGCAG GCAAGCTGAC CCAGGTCGTC CAAGTGATTG CCATAGCACT CACTGTTTTT CTGGTTCAAA AACTGGCTCA ATTCGGACAG GACACCATGC TTGCCGGGCC AGCATTGCGT GTTAGCCAAG ACCTGCGTCA TGATTTGTTT GCACAGCTGC AACAAGTAGA ACTGGGGGCC CTCGAGAAAC TGTCCTCAGG AGATCTCACC TATCGGCTCA CTGAGGATGC CGATCGTGTG GGAGAAGTGA TTTACAAGAC CATTCAAGAC ACCACACCAA GTGCTCTGCA ATTGGTGGCG GTATTTGGCT ATATGGTTTT TCTTGACTGG CAACTATCCC TAGCCACCCT GCTGCTGGCG CCGATAGTGG CGATCTTGGT GAGCCAGTTT GGAGCCAGAG TCATGAGAGC TGCCGAACGC AGCCAGCGAC AGGTGAGCGA TCTTGCAGGG CTACTTGGCG AAGCAATCCA AGGGTTGCCT TTGGTGAGAG CCTTTGCTGC AGAACCCTGG CTTCAGAAGC GCTTTGATGC CGAAGTTGAT CTTCATCGTC AAGCGCGTTA CCAAACCCTG CGTCTGCTCG CTCTGCAACA TCCTGTCGTG GGCTTCATCG AAGCCGCTGG CATCCTCACA GTCTTGGCGA TTGGTGCGGC TCGAATTCAA ACCGGCGGAA TGGATGGGCA AAGTTTCAGC AGCTATGTGG CTGCCTTGCT GATGCTGATC GATCCCATTA GCCACCTCAC CACGAATTTC AATGAATTCC AGCAAGGCCA GGCCTCACTA CGACGCCTGC GAGAAATTGA ACGCGAACCA CAGGAACCTC CTGACATTGA CCAGGCAGAA CCACTGGGTC GCTTAAAAGG TGATCTTGTG CTTCGTCAGG TCAGTTTTGC CTATGTCAAT GAGCAGCAGG TGCTTCATGA TCTATCTCTA GAAGTGAAGG CTGGCCAAGT CGTGGCATTG GTGGGTCCAT CTGGTGCTGG GAAGAGCACT CTGTTTTCAT TACTTTTACG CTTCAACACA GCCCAGCAAG GAAAGATTCT TCTAGATGGC CATGAGCTCG GCCAGGTCAA AGCCCAGGAG CTGAGACGTC AGGTGGCCTT AGTGCCCCAA CGAACAACAG TCTTCTCTGG CAGCGTCGAG GAAGCCATTC TTTTCGGTCG AAGTGCGAGC CAAGAGAAGG TCAAAGAAGC AGCAAGCCTT GCCAACGCTC ACGATTTCAT CATGTCCTTA CCGGAAGGAT ATTCCACTCA ATTGGAAGAA CGAGGCACAA ATCTTTCTGG TGGCCAACTT CAACGCATCG CAATTGCCAG AGCGGTGCTC GGCAATCCAG CCGTGCTGCT GTTAGATGAA GCCACTAGTG CACTAGACGC AGAAGCTGAA GCAGCGATAC AACTTGGACT ACGTCGTGCC ATGCAAGGAC GAACCGTTCT AGTGATTGCC CATCGTCTGG CAACTGTTCA GGAAGCAGAT CAGATTGTTG TGCTGGAACA AGGGCGTATT AGTGATCGTG GCAGCCATGA CGAACTAATG TCCCGCACGG GTCGCTATAG AGAGCTCTGC GAACGACAGT TCATTCGAGA TTTGCAGAGT GTCTCAAAAG TAGACGAAGG TATGGAACGC ATCCCATAG
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Protein sequence | MFSSSEAGFR RLLPLLRPHL RRLIWGGVCM LIYVGCWPLL AWLAGQLIPA IGAGKLTQVV QVIAIALTVF LVQKLAQFGQ DTMLAGPALR VSQDLRHDLF AQLQQVELGA LEKLSSGDLT YRLTEDADRV GEVIYKTIQD TTPSALQLVA VFGYMVFLDW QLSLATLLLA PIVAILVSQF GARVMRAAER SQRQVSDLAG LLGEAIQGLP LVRAFAAEPW LQKRFDAEVD LHRQARYQTL RLLALQHPVV GFIEAAGILT VLAIGAARIQ TGGMDGQSFS SYVAALLMLI DPISHLTTNF NEFQQGQASL RRLREIEREP QEPPDIDQAE PLGRLKGDLV LRQVSFAYVN EQQVLHDLSL EVKAGQVVAL VGPSGAGKST LFSLLLRFNT AQQGKILLDG HELGQVKAQE LRRQVALVPQ RTTVFSGSVE EAILFGRSAS QEKVKEAASL ANAHDFIMSL PEGYSTQLEE RGTNLSGGQL QRIAIARAVL GNPAVLLLDE ATSALDAEAE AAIQLGLRRA MQGRTVLVIA HRLATVQEAD QIVVLEQGRI SDRGSHDELM SRTGRYRELC ERQFIRDLQS VSKVDEGMER IP
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