Gene P9303_13891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_13891 
Symbol 
ID4777984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp1184893 
End bp1186671 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content53% 
IMG OID640086898 
ProductABC transporter 
Protein accessionYP_001017401 
Protein GI124023094 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.571762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCCT CCTCCGAAGC CGGCTTCCGC AGACTGCTTC CCCTCTTACG CCCCCACCTG 
CGCAGGCTGA TCTGGGGAGG TGTGTGCATG CTGATTTACG TAGGATGCTG GCCACTGCTG
GCATGGCTTG CTGGGCAGCT AATTCCAGCG ATCGGGGCAG GCAAGCTGAC CCAGGTCGTC
CAAGTGATTG CCATAGCACT CACTGTTTTT CTGGTTCAAA AACTGGCTCA ATTCGGACAG
GACACCATGC TTGCCGGGCC AGCATTGCGT GTTAGCCAAG ACCTGCGTCA TGATTTGTTT
GCACAGCTGC AACAAGTAGA ACTGGGGGCC CTCGAGAAAC TGTCCTCAGG AGATCTCACC
TATCGGCTCA CTGAGGATGC CGATCGTGTG GGAGAAGTGA TTTACAAGAC CATTCAAGAC
ACCACACCAA GTGCTCTGCA ATTGGTGGCG GTATTTGGCT ATATGGTTTT TCTTGACTGG
CAACTATCCC TAGCCACCCT GCTGCTGGCG CCGATAGTGG CGATCTTGGT GAGCCAGTTT
GGAGCCAGAG TCATGAGAGC TGCCGAACGC AGCCAGCGAC AGGTGAGCGA TCTTGCAGGG
CTACTTGGCG AAGCAATCCA AGGGTTGCCT TTGGTGAGAG CCTTTGCTGC AGAACCCTGG
CTTCAGAAGC GCTTTGATGC CGAAGTTGAT CTTCATCGTC AAGCGCGTTA CCAAACCCTG
CGTCTGCTCG CTCTGCAACA TCCTGTCGTG GGCTTCATCG AAGCCGCTGG CATCCTCACA
GTCTTGGCGA TTGGTGCGGC TCGAATTCAA ACCGGCGGAA TGGATGGGCA AAGTTTCAGC
AGCTATGTGG CTGCCTTGCT GATGCTGATC GATCCCATTA GCCACCTCAC CACGAATTTC
AATGAATTCC AGCAAGGCCA GGCCTCACTA CGACGCCTGC GAGAAATTGA ACGCGAACCA
CAGGAACCTC CTGACATTGA CCAGGCAGAA CCACTGGGTC GCTTAAAAGG TGATCTTGTG
CTTCGTCAGG TCAGTTTTGC CTATGTCAAT GAGCAGCAGG TGCTTCATGA TCTATCTCTA
GAAGTGAAGG CTGGCCAAGT CGTGGCATTG GTGGGTCCAT CTGGTGCTGG GAAGAGCACT
CTGTTTTCAT TACTTTTACG CTTCAACACA GCCCAGCAAG GAAAGATTCT TCTAGATGGC
CATGAGCTCG GCCAGGTCAA AGCCCAGGAG CTGAGACGTC AGGTGGCCTT AGTGCCCCAA
CGAACAACAG TCTTCTCTGG CAGCGTCGAG GAAGCCATTC TTTTCGGTCG AAGTGCGAGC
CAAGAGAAGG TCAAAGAAGC AGCAAGCCTT GCCAACGCTC ACGATTTCAT CATGTCCTTA
CCGGAAGGAT ATTCCACTCA ATTGGAAGAA CGAGGCACAA ATCTTTCTGG TGGCCAACTT
CAACGCATCG CAATTGCCAG AGCGGTGCTC GGCAATCCAG CCGTGCTGCT GTTAGATGAA
GCCACTAGTG CACTAGACGC AGAAGCTGAA GCAGCGATAC AACTTGGACT ACGTCGTGCC
ATGCAAGGAC GAACCGTTCT AGTGATTGCC CATCGTCTGG CAACTGTTCA GGAAGCAGAT
CAGATTGTTG TGCTGGAACA AGGGCGTATT AGTGATCGTG GCAGCCATGA CGAACTAATG
TCCCGCACGG GTCGCTATAG AGAGCTCTGC GAACGACAGT TCATTCGAGA TTTGCAGAGT
GTCTCAAAAG TAGACGAAGG TATGGAACGC ATCCCATAG
 
Protein sequence
MFSSSEAGFR RLLPLLRPHL RRLIWGGVCM LIYVGCWPLL AWLAGQLIPA IGAGKLTQVV 
QVIAIALTVF LVQKLAQFGQ DTMLAGPALR VSQDLRHDLF AQLQQVELGA LEKLSSGDLT
YRLTEDADRV GEVIYKTIQD TTPSALQLVA VFGYMVFLDW QLSLATLLLA PIVAILVSQF
GARVMRAAER SQRQVSDLAG LLGEAIQGLP LVRAFAAEPW LQKRFDAEVD LHRQARYQTL
RLLALQHPVV GFIEAAGILT VLAIGAARIQ TGGMDGQSFS SYVAALLMLI DPISHLTTNF
NEFQQGQASL RRLREIEREP QEPPDIDQAE PLGRLKGDLV LRQVSFAYVN EQQVLHDLSL
EVKAGQVVAL VGPSGAGKST LFSLLLRFNT AQQGKILLDG HELGQVKAQE LRRQVALVPQ
RTTVFSGSVE EAILFGRSAS QEKVKEAASL ANAHDFIMSL PEGYSTQLEE RGTNLSGGQL
QRIAIARAVL GNPAVLLLDE ATSALDAEAE AAIQLGLRRA MQGRTVLVIA HRLATVQEAD
QIVVLEQGRI SDRGSHDELM SRTGRYRELC ERQFIRDLQS VSKVDEGMER IP