Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_13301 |
Symbol | sbcC |
ID | 4778833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 1136910 |
End bp | 1139666 |
Gene Length | 2757 bp |
Protein Length | 918 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640086838 |
Product | RecF protein:ABC transporter |
Protein accession | YP_001017342 |
Protein GI | 124023035 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.639467 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTAT TGCACTGCCA TCTTGAAAAT ATTCGCCGTC ATTGGCTCTT GGATATCGAC TTTTCGCCCG GATTGACGTT GATTTCTGGA GCCAATGAAA GCGGTAAAAG CTCACTTGTG GAGGCGATGC ATCGAGGCTT ATTTCTCAAG GCCACAGCTA GCGGCTCGCT AGTAGAAGCG TTGCGCTCTA ATCTTTTCCC AGGCCACCCC CTCATTGAAC TTTCTTTTGA AGCAAAAGGT GCGATCTGGT CGTTGAGCAA ACGCTTTAGT GGTCAGAGTG GCAGCGTAAG GCTTGATGGA ACCGGGCAAG AAGTTCCACT CAGCGGTTCT GCAGCAGAAG AGCTCCTAGC AAAACTTCTT GGAGTTGATG AGATCGTTGG CAGTCGTCAG GCAGCGCGAG TCCTTCCGAG TCGATGGGCT CATCTCTGGG TGTTACAGGG ACTAGCTGGC CAGAATCTTT TAGATCAAGG ACCCCAGCAT TACGACCTCA ATGGGTTGAT GCAGCAATTG GAGCAACGGG CAGAAGTGTC TTTGCAATCA CCTCTTGATC AAAAGGTGAG TACGGAGTTG GAGGCTCTTG TGGAAGCCAC TTTCACGAGT CGAGGGGTTC GTCGTAACTC ACTTCTTTGG CAATGTCAGC AACAACGAGA GAGAGCGGAA GATGCTCTTA AAACTGCTGA ACTGCAACGG GACAGCTTTG AATCCACCAG TGCAGAGTTG GATCAATTGG AGCATGAGCT TGATTTGCTC ACGTCAGACC GCAAACCTGC CCTCAAGAAG CGACGTTTCG AGTTGCAAAC GCAACAGGAG CAGACCCGTC AAGACGAAGC TGCTCTGCTC CTTTATCGAC AGCAGCTCGA ACCTCTTCAA CTGCGAAAGA AACAACTGCA AAGCGTCCTT CATGCCAATC ATCAAATCCA CAATGAATTT CTCCTCTGCC AGAAGAATCT TGAGGATGGG AGTGAGCAGC AGACTCTGCT TAAGCACAAC CTTAGTGAGA CCAAAAAGCA GATTGAGACC ACACAGCAAA AGCTCGATGA TCTGGATCAA CAACGATCGG ATTGGGAATT AAGGGGTCTG CACATGAGAC GGTTGGAAGA ACTCACACAG CTCAGGTTTC AACGCGAATC CCTCCAACGA CAGCACAACG AGCAACAACG CTTGCGCAAC CAATCCCAAA CACTGCAAAT TCAACTCGAG GCACTGCCTG ATCTTGGTGT GGCTAACTTG CAGCACCTTC GTGATTGTTA TGACCAAGTC AAAGGATGTG CTATTCGCAT TGAAACGATG GCATCTGAGT TCAATCTAGA ACGTGCTGAT CAACCTGTAC TTGTCGATGG TTTTCCTTTG AAGGAGGGTG AGACGAAACG CCTTATATCA AGCTTCACCG TGAATGTTGG TGAAGGAGTT CGCTTTCATG TTAATCCTGG GCAAGGTACG GGAATTGAAG AACTAAAACG TGACCATGAG AGGCATCTTC TGAAGTACAC GGACACCCTA AAGGCTTGGC AAGTGAACTC CTTGGAGGAA GCCGAACAAA AGATTAATCA CAGAAATCAG TTGAGTCAGC AATTGAATCT TATCAACGAA CAACTCAATG GATGTCAAGA TGGACATGAT GGAAACATAA GCCTATCTCT ACAGAAAAAA CAACTTGAAA ATCGTCAGCA TGAACTTGAA AAAGAGATGA CCTCAGAACC AGAACTTTCA AGGCTAGATG ATAGTTTACT CTCTAATGAT GGAAGCTTTA ATCAACCTCT TGATCTCGAG ACCATCCGCA TTGAGCTTAA GCGATGTCGC CAGAATTACA GAAGCATTAG TGAGTCAATT AAGGCAATCA AGTTGCAACT TCAGCAGCTG CATCGAGAAG AGTATGAGCA AGACAAGAAC TTACAGAAGC TTACACTTTC ACTTGAGGTG CTAAGTGCAA AACAAATTGA ACGAAAAGAA CATAGGAAAT CTCTTTTGAC TGAACATGGT CCTGAACCAG ACATTGAGGA AAAACTACTG AAACTTAATC AGTCACTGAC TCACTTGGGA CAGAAAGTTT CTGATTTGGA ACAACAGCTC GGAAACCAAA CTCTACAAGC TATCAAGTCA GCTCTTGCAG AGCTTGATGC CCAGGAAAAA CGTTTGCAGG AACATTTACA GGTGCTTAGC GGACAACGAG GAGCTCTGCG TGAACGCTGT GAAGGGCTTG GAAGCCTTGA ACCTTATGCT GCTCTTGAGG AAGCCCGCGT TAACTTCAAT CAGGCCAAGC TGGAGGAGCG TGAACAATTG ATGCTTGCTC ATGCACAGCA AAGGCTCTTG AAATCATTTC AACAAGCTCA AGCCGAACTA TCAAATCGAT ATACGACTCC ACTTAGGCAG GCAATTTGTT CTTACTTACA GCCCCTGCTT GGTAACGAAA ATGATGGTTG TCACCTTAAT TTCGACCCTC ATGATGGATT TCGAGAATTA GGCCTTCGAC GTGACGGTCA AAACGTACAA TTTCGAGATT TAAGTGGCGG TATGAAGGAA CAGCTCAATG GGGCTCTTCG TCTTTCGATC GCTGATGCCC TCAAAGGAGG ACATGACGAC TGTTTGCCAA TTCTGTTTGA TGATGCTTTT ACCAATACTG ATCCAGATCG CATCGAGTCA GTGCTTAGGA TGATGACCCA GGCGGTAAAG CGCGGCCTTC AGGTGATTGT GCTCAGTTGC GACCCAACAC CTTACGAAAC AATTGCGGAT AAGACTATTT ACTTGCCAAG TCCTTAA
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Protein sequence | MRLLHCHLEN IRRHWLLDID FSPGLTLISG ANESGKSSLV EAMHRGLFLK ATASGSLVEA LRSNLFPGHP LIELSFEAKG AIWSLSKRFS GQSGSVRLDG TGQEVPLSGS AAEELLAKLL GVDEIVGSRQ AARVLPSRWA HLWVLQGLAG QNLLDQGPQH YDLNGLMQQL EQRAEVSLQS PLDQKVSTEL EALVEATFTS RGVRRNSLLW QCQQQRERAE DALKTAELQR DSFESTSAEL DQLEHELDLL TSDRKPALKK RRFELQTQQE QTRQDEAALL LYRQQLEPLQ LRKKQLQSVL HANHQIHNEF LLCQKNLEDG SEQQTLLKHN LSETKKQIET TQQKLDDLDQ QRSDWELRGL HMRRLEELTQ LRFQRESLQR QHNEQQRLRN QSQTLQIQLE ALPDLGVANL QHLRDCYDQV KGCAIRIETM ASEFNLERAD QPVLVDGFPL KEGETKRLIS SFTVNVGEGV RFHVNPGQGT GIEELKRDHE RHLLKYTDTL KAWQVNSLEE AEQKINHRNQ LSQQLNLINE QLNGCQDGHD GNISLSLQKK QLENRQHELE KEMTSEPELS RLDDSLLSND GSFNQPLDLE TIRIELKRCR QNYRSISESI KAIKLQLQQL HREEYEQDKN LQKLTLSLEV LSAKQIERKE HRKSLLTEHG PEPDIEEKLL KLNQSLTHLG QKVSDLEQQL GNQTLQAIKS ALAELDAQEK RLQEHLQVLS GQRGALRERC EGLGSLEPYA ALEEARVNFN QAKLEEREQL MLAHAQQRLL KSFQQAQAEL SNRYTTPLRQ AICSYLQPLL GNENDGCHLN FDPHDGFREL GLRRDGQNVQ FRDLSGGMKE QLNGALRLSI ADALKGGHDD CLPILFDDAF TNTDPDRIES VLRMMTQAVK RGLQVIVLSC DPTPYETIAD KTIYLPSP
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