Gene P9303_06451 details

Gene Information

• Locus tag: P9303_06451
• Symbol: ctaB
• ID: 4778802
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 607953
• End bp: 608954
• Gene Length: 1002 bp
• Protein Length: 333 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640086152
• Product: protoheme IX farnesyltransferase
• Protein accession: YP_001016662
• Protein GI: 124022355
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor)
• TIGRFAM ID: [TIGR01473] protoheme IX farnesyltransferase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.0855264
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGTTAGTT CAACGCCAGA GATGCTCCAG GGGGGGCTTA CCCGTGAGCA GATCGTGCCT 
TCTCGCAAGC GGATCAAGCT GCCAGCTTGG TTGGAGATTG CCAAACCACG CTTAATTCCA 
CTGCTTTTGG CCACAACCCT TGGTGGGATG GCGCTATCCG AAGGTTGGCC CCTACCTTCT 
CTCAGACTGG CCTGCACCCT AGGAGGAGGG GCTCTGGCTG CTGCTGCTGC TGGTGTTCTC 
AACTGCATTT GGGAACAGGA TCTTGATGGG CGCATGCAAC GCACAAGTGG TAGGGCTTTG 
CCTTCAGGAC GCTTGTCTCC AACTGCGGCG TTCATCGGTG CCATCTCTTG CACCTTGGCG 
GCAGCGGCTC TGTTGGTAAG TGGTGTGAAC TGTCTTGCGG CTGGCCTGTC TTTGCTTGGT 
CTGTGCAGTT ACGTGCTGCT TTACACGGCA ATCTTGAAGC CCCGCACTCC CCAAAACATT 
GTCATTGGAG GGGTTGCTGG AGCGATCCCC CCTCTCGTGG GTGCGGCTGC GGCCAGTGGG 
CATGTGGGCC TTAGTGGATG GTGGTTGTTT GCCCTGGTCA TGCTTTGGAC CCCAGCGCAT 
TTTTGGGCAC TGGCCCTGTT GCTGCGAGAC GACTACAGGG CTGTTGGGAT ACCCATGCTT 
CCTGTCGTTA AGGGCCCTGT GGTCACCGTC AGAGCCATTT CTCGTTATGG CTGGGCCACG 
GTTCTACTCA GCGGTTTTGG TGTCTGGGCC TTGCCGGAGG GGGGCTTGCT CTACGGACTT 
TTGTTGATCC CTTTCAATGC TCGTCTGCTG CAAATGGTTC ATCAGCTAGG TGCTGCTCCG 
GAGAATGTTG ATCGAGCCAA GGGGCTCTTC CGTTGGTCGA TCTTCTATAT GTTTGGTATC 
TGCCTTCTTC TGGTGGTTAG TCGTTTGCCT ATGGCGGCTA ATTTTGATCT TCAGGCCTGG 
TCTTTGCTTC AGCAGATGGC GAGCAGTGGG CAGTTCATCT AA 

 

Protein sequence

MVSSTPEMLQ GGLTREQIVP SRKRIKLPAW LEIAKPRLIP LLLATTLGGM ALSEGWPLPS 
LRLACTLGGG ALAAAAAGVL NCIWEQDLDG RMQRTSGRAL PSGRLSPTAA FIGAISCTLA 
AAALLVSGVN CLAAGLSLLG LCSYVLLYTA ILKPRTPQNI VIGGVAGAIP PLVGAAAASG 
HVGLSGWWLF ALVMLWTPAH FWALALLLRD DYRAVGIPML PVVKGPVVTV RAISRYGWAT 
VLLSGFGVWA LPEGGLLYGL LLIPFNARLL QMVHQLGAAP ENVDRAKGLF RWSIFYMFGI 
CLLLVVSRLP MAANFDLQAW SLLQQMASSG QFI