Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_05691 |
Symbol | glgX |
ID | 4778494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | - |
Start bp | 548162 |
End bp | 550276 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640086075 |
Product | putative isoamylase |
Protein accession | YP_001016586 |
Protein GI | 124022279 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCAATG CTTTCTGCCT CGCCGCAGAC ACAGCTGTAA GCAAGATGCA TCTCGGCACT CCTTGGCCCC TGGGCAGCAC GATCACAACA CGAGGCGTCA ATTTCTCTGT GGCCGCCCCA ACTGCAAAGC GCGTGGAGCT GCTGCTGTTT GCCGATGCAA ATGCCACGCA GCCAGAGCAC ATCCTCGAGC TCCAGCCTTG CCATCGATCC GGCGACTACT GGCATGTTGA GGTGGAAGGA TTGCGAACTG GCTGCTGTTA TGGCTATCGG ATCTTCGGCC CCCACAACAC TGGCAGCGAT AGCTTTCACC CCTCCAAGGT GTTGCTTGAT CCCTGCACAA GAGCCATCAC TGGCTGGGAT ATCTATCAAA GAGAACAGGC CAAGGGATCG TCGCCCAATA TCCAAGCCTG CCTAAAGGGA GTGGTGTGCG AACGAGAACA TTTTGACTTC GCATCCCATC CACGCCCCAG GACCCCATGG AACCGCAGCG TGATCTACGA ACTGCATGTA GGGGGGTTCA GCAGCGGCCC GAAGTCAGAG GTAACACCTC AGCGCCAAGG CACCTTCCTG GGACTCATTG ACAAACTTCC CTATCTGCGA CAACTGGGTA TCACGGCCAT AGAGCTGCTA CCTATTTTTG CTTTCGATCC CTCTGATGCG CCAACGGGGC GGGACAACTA CTGGGGCTAC AGCCCTCTGA ACTGGTTCAC TCCCCATCCC AAATATGTTC ATGGTGACGA TCCATTGCAG GCTCGCCAAC AAGTCCGCGA GCTGGTTGCG GCCTGTCATG ACGAGGGTAT TGAAGTCATC CTTGACGTGG TCTACAACCA CACCACTGAA GGCAGCCTTG ATGGCCCCAC ACTCAGCTGG CGAGGCTTCA GCGATGCTCT CTATTACCAC CAAAACGACA GTGGCGAATA CCTGGATGTA AGTGGTTGCG GCAACAGCAT CGCCGCCAAT CGTCCAATCG TGAGGCAGCT GATTCTCGAA TCGATGCGTT GCTGGGCCAT CGAACTAGGA GTCGATGGCT TCCGCTTCGA TCTAGGGATC GCCCTGAGCC GAGGCGAAGG CCTAAAGCCG CTCGAACACC CTCCCCTATT TGAAGAGATT GAAGCTGATC CAGAGCTCAG CGATTTAAAA CTGTTTAGCG AACCATGGGA TTGCGGTGGC CTCTATCGAC TCAGCGATTT CCCAGCACAA CGAATCGGAA CATGGAATGG CCATTACCGA GATGATCTAC GTGCCTTCTG GAAAGGAGAC GAAGACAGCG CCTGGAGGAT GGGACAACGC CTAAGCGGAA GTGCTGATCT CTACAAAGGT GAACCAGCTC CACTGGGACG TTCCCTGAAC TTCATCACTG CACACGATGG CTTCACCCTC AATGACCTGG TGAGTTTCAA CCGCAAACAC AACCTCGCCA ATGGAGAGAG CAACCGCGAC GGTGAAAATC ACAACAACAG CTGGAACAAC GGCATTGAAG GCCCCTGCAG TGACCATGCC GTGCAAGCCC TCCGCCATCG CCAGATGCGC AATCTGATCG CCACCCTGTT GCTTTCAAGA GGAGTGCCAA TGCTGTTGAT GGGAGATGAA GTGGGCCGCA GCCAGGGGGG TAACAACAAC AGCTGGTGTC AGGACAACCC GCTCGGCTGG ATGCTCTGGA ACCCTGAACA ATGCGATATG GATTTGCACC TCTTCGTCAG CAGGCTGCTG ATGATTCGCC AGCAACTTTC GGAACTCTTC TGTCCCATCA ATCCCCCCCC TGAAGAGATG CCCGTAAGTC TTCAGCAGAG TCCTGACGAT CTATGGCTGC AATGGCATGG TGTTGAGATC GACAAGCCCG ATTGGGGCAG CTGGTCCCAT ACCATCTGCT ACAGCCTGAA TCGAGGCTCC AGCGGTGCGG TGATGTGGAT GGGCTTCAAC GCCTACAGCA AAGCCATGCA TTTTGACCTG CCTAAACCGA CTTCTGCGTG GCATCTCCTC CTGGACACAG CATGTCCCAG CCCAGATGAT CTACCCGCAA GACCTAATGC ATGGACTTCA GTGGACATTG ATCTGCAGAA CCGCAGCATG TTGATCTTGA TGGCAGAGGA ATACGCCTCA AAACTCAAGC TCTAA
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Protein sequence | MPNAFCLAAD TAVSKMHLGT PWPLGSTITT RGVNFSVAAP TAKRVELLLF ADANATQPEH ILELQPCHRS GDYWHVEVEG LRTGCCYGYR IFGPHNTGSD SFHPSKVLLD PCTRAITGWD IYQREQAKGS SPNIQACLKG VVCEREHFDF ASHPRPRTPW NRSVIYELHV GGFSSGPKSE VTPQRQGTFL GLIDKLPYLR QLGITAIELL PIFAFDPSDA PTGRDNYWGY SPLNWFTPHP KYVHGDDPLQ ARQQVRELVA ACHDEGIEVI LDVVYNHTTE GSLDGPTLSW RGFSDALYYH QNDSGEYLDV SGCGNSIAAN RPIVRQLILE SMRCWAIELG VDGFRFDLGI ALSRGEGLKP LEHPPLFEEI EADPELSDLK LFSEPWDCGG LYRLSDFPAQ RIGTWNGHYR DDLRAFWKGD EDSAWRMGQR LSGSADLYKG EPAPLGRSLN FITAHDGFTL NDLVSFNRKH NLANGESNRD GENHNNSWNN GIEGPCSDHA VQALRHRQMR NLIATLLLSR GVPMLLMGDE VGRSQGGNNN SWCQDNPLGW MLWNPEQCDM DLHLFVSRLL MIRQQLSELF CPINPPPEEM PVSLQQSPDD LWLQWHGVEI DKPDWGSWSH TICYSLNRGS SGAVMWMGFN AYSKAMHFDL PKPTSAWHLL LDTACPSPDD LPARPNAWTS VDIDLQNRSM LILMAEEYAS KLKL
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