Gene P9303_01921 details

Gene Information

• Locus tag: P9303_01921
• Symbol: smpB
• ID: 4775948
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: -
• Start bp: 211205
• End bp: 211702
• Gene Length: 498 bp
• Protein Length: 165 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640085691
• Product: SsrA-binding protein
• Protein accession: YP_001016212
• Protein GI: 124021905
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 18
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCCAAGG GAGGAAACAA AAAAGCGACT GCTGCTGCTC GAGCCGCGGC CAACCGTCTG 
CTCGCGGACA ACCGTCTGGC AAGGCATCAA TACGAGATCC TCGACACCCT TGAAACTGGC 
ATTGAGTTGG TGGGAACCGA AGTCAAGTCA ATCCGGGCCG GCCAAGCCAA TCTCCGCGAT 
GGCTTCTGCC TGATTCGCAA GGGCGAACTA CAGCTCCACA ACGTTCACAT CTCCCCTCAT 
AGCCATGCCG GCAGCTACTT CAATCACGAT CCACTACGAA CACGCAAACT GCTCGCGCAC 
CGCCGTGAGA TCGACAAACT TCGCGGCCAA CTCGACAGAA AAGGGCTCAC CCTGATTCCC 
CTCAACCTTC ATCTCAAGGG TTCATGGATC AAACTCACGA TTGGGCTGGG CAAAGGTCGC 
AAGCTGCACG ACAAACGCCA AGAGGAGAAA CGAAAACAAG CTGATCGAGA AGTGAAGTCC 
GCTCTGGCGC GCTACTGA 

 

Protein sequence

MAKGGNKKAT AAARAAANRL LADNRLARHQ YEILDTLETG IELVGTEVKS IRAGQANLRD 
GFCLIRKGEL QLHNVHISPH SHAGSYFNHD PLRTRKLLAH RREIDKLRGQ LDRKGLTLIP 
LNLHLKGSWI KLTIGLGKGR KLHDKRQEEK RKQADREVKS ALARY