Gene P9301_18371 details

Gene Information

• Locus tag: P9301_18371
• Symbol: holA
• ID: 4911159
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9301
• Kingdom: Bacteria
• Replicon accession: NC_009091
• Strand: +
• Start bp: 1559131
• End bp: 1560132
• Gene Length: 1002 bp
• Protein Length: 333 aa
• Translation table: 11
• GC content: 25%
• IMG OID: 640161442
• Product: DNA polymerase III subunit delta
• Protein accession: YP_001092061
• Protein GI: 126697175
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1466] DNA polymerase III, delta subunit
• TIGRFAM ID: [TIGR01128] DNA polymerase III, delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.926744
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAATAC AAATATTATG GGGTAATGAT TTAAATGCTC AAAATACATT TATCCAAAAA 
TTAATTGATA AGGAAGTATC CAAAGAATGG AAAGAAATAA ACGTAACAAA TTTAAATGGA 
GATGATGATG AGCAAGTAAA TAAAGCTCTT GATGAAGTTC TTACACCTCC TTTTGGAGAG 
GGATACAGAA TAGTTACATT GAAAAATAAT CCAATTTTTA CTTCCAAAAA TGAGGATCTA 
AGAACTAAAT TTGAAAAAAT TCATGACAAT ATACCTCAAA ATACTTATTT CATTTTACAA 
AATACAAAAA AACCAGACTC AAGACTAAAG AGTACTAAAT TTTTACAAAA ACTTATCAAA 
AATAATTTAG CCAAAGAAAA GTCATTTTCT TTACCAGAAA TCTGGGACTA TGAAGGACAA 
AAAAGATTTT TAGAAGATGC AGCAAATGAA ATGAATATCA AAATTGATAA AAATGCAGCT 
GAATTAATAA TTGATTCAGT TGGCAATGAT AGCTATAAAC TAATAAATGA ATTAGCTAAA 
GCAAAAACAT ACCTTTCAGC AGTATCAAGT GATTCGAATT CACAACTTTT TCTTAAAAGT 
ATTGATGTAA AAAAAATATT TAGTGATCAT CAATCCAATA TATTCAAAAT CATTGATCTT 
CTCTTACAAA AAAATATTAA TGAAAGCCTC ATAGAAATAA ATTATTCTTT ACAGAAAGGA 
GAACCTGCTT TAAGACTAAA TGCAGGTTTA ATTAGTCAAA TAAGAATTCA TACCATTATA 
AAATTGGCAA TTAATTCAGG TAACGATAAT GAAGAAAAAA TTTGTAATCT TGCAGGCATT 
TCTAATCCAA AACGAATTTT TTTTATTCGA AGAAAAGTCA AAAATGTATC TCAAGAATAT 
TTAATTAATT TAATGAGTAA CTTACTAGAT ATTGAAACAT TACTAAAACA AGGTAATAAT 
CCTATAAATG TTTTTACGGA GAAATTAATT AATTTAAGTT AA 

 

Protein sequence

MPIQILWGND LNAQNTFIQK LIDKEVSKEW KEINVTNLNG DDDEQVNKAL DEVLTPPFGE 
GYRIVTLKNN PIFTSKNEDL RTKFEKIHDN IPQNTYFILQ NTKKPDSRLK STKFLQKLIK 
NNLAKEKSFS LPEIWDYEGQ KRFLEDAANE MNIKIDKNAA ELIIDSVGND SYKLINELAK 
AKTYLSAVSS DSNSQLFLKS IDVKKIFSDH QSNIFKIIDL LLQKNINESL IEINYSLQKG 
EPALRLNAGL ISQIRIHTII KLAINSGNDN EEKICNLAGI SNPKRIFFIR RKVKNVSQEY 
LINLMSNLLD IETLLKQGNN PINVFTEKLI NLS