| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9211_08501 |
|---|
| Symbol | |
|---|
| ID | 5731347 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9211 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009976 |
|---|
| Strand | - |
|---|
| Start bp | 743901 |
|---|
| End bp | 744440 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641285214 |
|---|
| Product | transcription regulator |
|---|
| Protein accession | YP_001550735 |
|---|
| Protein GI | 159903391 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
|---|
| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.152979 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00163569 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | TTGGCCATCA AAAGCGAAAT CTCACCACTA GAAAGAGATC TAGTTAAAGG TATATCCTTA
CCAGCAAAGC TAGAAGCAGT GCTTTACCTA AAAGGCAAAC CACTATCGCT TTCTGAGATG
GCAGAGTTAG TAAATGAGAC TGAAGATATT ACTGAACAAG CCTTATTTGA ATTAATGGCT
GGGTATTCTC AACGAGACAC TGCTTTGGAA ATCAATGAAA AGAAAGGAAA ATATAGCCTT
CAACTTAAAA CAGGTCTAGG AGAACTAGTA AAAAATCTCT TGCCCGTAGA TATGACTGGA
GCTACCTTAA GGACACTTGG AACAATTGCA TTAAAAAAAC GAATTCTTCA ATCTGAGCTT
GTAGACCTAA GAGGCTCTAG CGCCTATGAA CATATAAAAG ACCTTGTAGA AAAAGATTTT
GTTGAAAGAA AGCGACAAAG AGAGGGGAGA TCTTACTGGC TTACACTTTC AGAGAAATTC
CACAGAACAT TCTCTGTACT TCCTGATATC AAACCGACAA ACGACCAAGA TGTCGCTTAA
|
|---|
| Protein sequence | MAIKSEISPL ERDLVKGISL PAKLEAVLYL KGKPLSLSEM AELVNETEDI TEQALFELMA
GYSQRDTALE INEKKGKYSL QLKTGLGELV KNLLPVDMTG ATLRTLGTIA LKKRILQSEL
VDLRGSSAYE HIKDLVEKDF VERKRQREGR SYWLTLSEKF HRTFSVLPDI KPTNDQDVA
|
|---|
| |