Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4620 |
Symbol | |
ID | 6206138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5936714 |
End bp | 5937937 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641694288 |
Product | L,L-diaminopimelate aminotransferase |
Protein accession | YP_001821491 |
Protein GI | 182416425 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03542] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCA TCAACGAAAA CTACACGAAG CTGAAGGCTT CCTATCTGTT CAGCGACATC GCCCGCCGCG TGAACACCTT CGCCGCCGCC CATCCCGGTC AGCCCGTGAT CCGGCTCGGC ATCGGCGACG TGACCGAACC GCTGCCGCCC GTGTGCGTTG AGGCGCTCCA CGCCGCGAGC GATGAGATGG GCCAGCGGGC CACCTTCAAG GGTTACGGTC CGGAGCAGGG CTACGCGTTT CTCCGCGAGG CGATCGCGCA GCACGACTTC GCCGCGCGCG GCTGCGCGAT CGATCCGGAC GAGATCTTCG TGTCCGACGG CGCCAAGTGC GACTGCGGCA ACATCCAGGA AATCTTCGCC CACGATCTCC GGCTCGCCAT CCCGGATCCG GTGTATCCCG TCTACGTCGA CACCAACGTC ATGGCCGGCC GCACTGGCCC GAACGTCGAC GGCCGCTACG AGGGGATCAC CTATCTCGAT TGCACGCCCG CCAACGGCTA CATCCCCGCG ATCCCCACCG CCGCTAGCGA CCTGATTTAT CTTTGTTTTC CCAACAATCC GACAGGCGCC GTCGCCACGA AGGCCCAGCT CGCCGCGTGG GTGGACTACG CCCGCCGACA CCGCGCGATC ATCCTCTTCG ACGCCGCCTA CGAGTCGTTC ATCCGCGATC CCCGGATTCC GCACAGCATC TACGAGATCG ACGGCGCGCG CGAGGTCGCG ATCGAATTCC GCAGCTTTTC CAAGACCGCC GGGTTCACCG GCACGCGCTG CGCCTTCACG GTGATCCCGA AGTCGCTCAA GGCCTGGGAC GCCGCCGGCC ACGAGCACTC GCTGCACGCG ATGTGGAATC GCCGGCACAC GACGAAGTTC AACGGTGTCG CCTATCCGAT CCAGCGCGCC GCCGCCGCGA TCTACACCGA TGCCGGCCGT CAGCAGACAC GGGCGCTCAC GAGCTTCTAC CTTGAGAACG CCGCGCTCAT CCGCAAGGCG ATGCTCCAGC TCGGTTTCAC CTGCAGCGGC GGCGACAACG CGCCCTACAT TTGGGTGAAC GTCGGCCGCG ATTCGTGGGA GTTCTTCGAC CTGTTGCTCA ACCGCGCCCA AGTCGTGTGC ACGCCCGGCG CAGGATTCGG CAAATGCGGC GAAGGCCACG TGCGGATCAG CGCGTTCAAC TCGCGCGACA ACGTCGTCGC CGCGCTTGAG CGGATCGCGC AGGCGCTAAA GTGA
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Protein sequence | MIRINENYTK LKASYLFSDI ARRVNTFAAA HPGQPVIRLG IGDVTEPLPP VCVEALHAAS DEMGQRATFK GYGPEQGYAF LREAIAQHDF AARGCAIDPD EIFVSDGAKC DCGNIQEIFA HDLRLAIPDP VYPVYVDTNV MAGRTGPNVD GRYEGITYLD CTPANGYIPA IPTAASDLIY LCFPNNPTGA VATKAQLAAW VDYARRHRAI ILFDAAYESF IRDPRIPHSI YEIDGAREVA IEFRSFSKTA GFTGTRCAFT VIPKSLKAWD AAGHEHSLHA MWNRRHTTKF NGVAYPIQRA AAAIYTDAGR QQTRALTSFY LENAALIRKA MLQLGFTCSG GDNAPYIWVN VGRDSWEFFD LLLNRAQVVC TPGAGFGKCG EGHVRISAFN SRDNVVAALE RIAQALK
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