| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4611 |
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| Symbol | |
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| ID | 6207337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5921272 |
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| End bp | 5923110 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641694279 |
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| Product | OPT family oligopeptide transporter |
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| Protein accession | YP_001821482 |
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| Protein GI | 182416416 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCG AGTTTGTCCG CCCCGCCACC GCCGAACCCA GCACACAATC CGAGCGCGAA
ACCGCCTGGC TGGCCGCGAC CTATCGGCCC TCCGAGCCGA ACCTCACGGT GCGCGCGGTC
GTCGTGGGCA TGCTGATCGG CGCCGCGATG TGCCTGTCGA ACCTGTATGT GTTCTTCAAA
ACCGGCTGGA GCATGGGCGT CACGCTCACG GCGTGCATCC TCGCGTTCGG CGCGTTTCAG
GCGCTGCAGG CCGCGCGCAT CGTGAAAAAG CCGCTCGGCG TGCTCGAAAA CAACGCGCTG
ACCACGGTGG CCTCCGGCGC GGGCTACATG ACCGGCGGCG GCAACATGGC GGCATTCGGT
GCGCTGCTGA TGGTCACCAC GTTCCGACCC GAGCCGCTGC CGATGGTCGC GTGGTTCGGA
TTGATTGCCG CGCTCGGCGT TTTCGCCGCC ATCCCGATCA AGCGGCAGTT GATCAATCAG
GAGGGCCTCG CGTTTCCCAC CGGCACGGCC ACGGCCGAAA CCATCCGCTC GATCCACGAC
GCCGCGGCGG GCGCGGGCGC CAGCAAGGCC GCATGGCTCG GCTGGTCCGC AGTCGGCGCG
GCGGTGCTCA CGTGGTTCCG CGATGCGTGG CATTGGATCC CGACCACCCT CGGGCTGCCG
CTCACCCTCG CCGGCCGCTC GCTGGCGGAA TGGACGTTGT CGCTCAAAGC CGAAGTGGTG
CTGATTGGTG GTGGCGCGCT GATGAGTTTC CGTACCGGCT GGTCGCTGTT GCTTGGCGGA
CTGCTGACGT ACGCCGTCCT CGCGCCGTCG CTGCTGAGCC GCGGCATCAT CGACAGCGTG
AGCTACAAAG CCATCGTGGC GTGGACGCTC TGGCCGGGCG CGGCAATTCT GGTCGCGTCG
GGGCTCACCT CGTTTGCGCT CGATTACAAG AGCATCGCGC GATCGTTCAC CGGACTCACG
CAGATCTTCC GGCGCCGCCA GGCGCCAGCC GCCTCGGGCA TCTCGGCCGT CGAGTGTCCG
GAGTGGTGGT TTCCCACGGG ATTCATCGTG CTCGGGCCGT TCGTCGTAGC GCTCATGGTC
TGGTTGTTCC AGATCCCGGT CTGGGCCGGC GTGATCGCCG TCCCACTCGC AGTGGTGATG
GGCTTCGTGG CCGCGCGCGT CACCGGCGAG ACGGACGTGA CGCCGACCAA GGCACTGGGA
CCCGTGACGC AGTTGATCTA CGGCGTGATC ACGCCGGGCA ATCTCTCGGG CAACATCATG
TCGGCGAACG TCACCGGCGG GGTCGGACTG CACGCGGCCG ATCTTCTTAC CACGCTGAAG
ACGGGCTGGC TGCTCGGCGC GAAACCGCGC CACCAATTCT ACGCGCAGCT GTTCGGCGTG
CTCGCCGGCG CCGCGATTGT GGTGCCCGCC TTCAACCTGA TCCTGCCCGA TCCCAGCGTG
CTCGGCGGTG AAGCGTGGCC GGCGCCGTCC TGTGTCGTGT GGGCCGGCGT GTCGAAGGCG
TTTTCGGGTG GCATCGGCGC GCTGCATTCG ACCGCCAAGA CCGCGATTCT CGTCGGCCTC
GCGCTGGGCA CGGCGTTGGC GCTGATGGAA AAATTCGCAC CGCGCCGGCT GCGGACGGTA
CTCCCCTCGC CCGCCGGACT CGGGATCGCG ATGGTGATTC CCGGCAGCAA CGCGATCGCG
ATGTTTCTCG GCGCCGCCGC GGCAGAATGG ATGCGGCGAA AATTCCCCGT CACGGCGGAG
AAAACCGTCG TGCCGGTCGC CTCGGGCCTG ATCGCCGGCG AAAGTCTGAT GGGCATCCTG
ATCGCGTTGC TGATCGTCAC CGGCGTGCTG GCCGCGTGA
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| Protein sequence | MSAEFVRPAT AEPSTQSERE TAWLAATYRP SEPNLTVRAV VVGMLIGAAM CLSNLYVFFK
TGWSMGVTLT ACILAFGAFQ ALQAARIVKK PLGVLENNAL TTVASGAGYM TGGGNMAAFG
ALLMVTTFRP EPLPMVAWFG LIAALGVFAA IPIKRQLINQ EGLAFPTGTA TAETIRSIHD
AAAGAGASKA AWLGWSAVGA AVLTWFRDAW HWIPTTLGLP LTLAGRSLAE WTLSLKAEVV
LIGGGALMSF RTGWSLLLGG LLTYAVLAPS LLSRGIIDSV SYKAIVAWTL WPGAAILVAS
GLTSFALDYK SIARSFTGLT QIFRRRQAPA ASGISAVECP EWWFPTGFIV LGPFVVALMV
WLFQIPVWAG VIAVPLAVVM GFVAARVTGE TDVTPTKALG PVTQLIYGVI TPGNLSGNIM
SANVTGGVGL HAADLLTTLK TGWLLGAKPR HQFYAQLFGV LAGAAIVVPA FNLILPDPSV
LGGEAWPAPS CVVWAGVSKA FSGGIGALHS TAKTAILVGL ALGTALALME KFAPRRLRTV
LPSPAGLGIA MVIPGSNAIA MFLGAAAAEW MRRKFPVTAE KTVVPVASGL IAGESLMGIL
IALLIVTGVL AA
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