| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4556 |
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| Symbol | |
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| ID | 6207474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5854773 |
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| End bp | 5855858 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641694224 |
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| Product | 3-dehydroquinate synthase |
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| Protein accession | YP_001821427 |
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| Protein GI | 182416361 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.491916 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.20017 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAACA CGTTGACCGT CGATCTCGGG CACCGCAGCT ACCCGATCGT CTTTGCGGCC
GATGTGCGTA ATAACGTCCG CGATCAAGTC GCAGAGCTCA CCACCGCCGG CCGCAAAGTG
GCGGTGTTCA CCGACGAGCA GGTGGCATCG GCCCAAGTCG GGGCGCTGGA AGCGATGTTT
GGCTCCTCAC CGCGACTCGC GTTCGCGCCG GGCGAATCCG CGAAGTCACT CGCCTCATTT
GGCCGCGCGA TGGATTTCCT GGCTGCGCAA AAAGTCGATC GCCGTGGTGT CGTCTTCGCT
TTCGGCGGCG GGGTAATCGG CGATCTTGCC GGTTTCATCG CGGCGAGCTG GCTGCGCGGG
ATCGATTTTT ATCAGGTGCC GACGACGTTG CTCGCGATGG TCGACAGCTC CGTCGGCGGC
AAGACCGGGA TCAACATCCC GGCCGGCAAA AATCTCGTCG GGGCGTTTCA CCAGCCGCGC
GGCGTGTTCA TCGGGACGGA TTTTCTGCGG ACGCTGCCGG CGCGGGAATT TGCCGCGGGT
ATGGCCGAGG TCATCAAGTA TGGCCTCCTC GGCGACGCGG CGCTGCTGGA GCTGCTCGAG
CGGGCGCCGT TGAGCTTTGT GAGTCCCGAA CTCGCCGGTG TGATTCGTCA ATGCTGTGCG
TTGAAAGCGG CCTTCGTGCA GGCGGACGAG CGGGAACTCG CTCCCGAAGG CGGCCGCGCG
TTGCTTAACC TGGGCCACAC GTTCGGTCAC GCCATCGAGC AGGTGACCGG CTATGGCGTC
TACCTGCACG GCGAAGCCGT GGCGATCGGG ATGTGCGCGG CGGCGCGGTT GTCGGCAAAG
CTGGGCCACC TCGGCGGGGC GGACGTGGCG CGCGTCGATG CGGTGGTTGC GGCGCACCGG
CTGCCAGTGA AGTTACGGAC ACCGCTCGTG CTGATGGACC TGTTGGCCGC GATGGCGCGC
GACAAAAAAG TGCGCGCGGG CATGCCGCGC TTCGTGGTGC TCCGAAAGCT CGGTGAAGCC
GTCACGCAGG ACGACGTACC CGCGGAACTC GCGGCGGAGT GCTTCCGCGA AGTCGGCGCG
AGCTGA
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| Protein sequence | MPNTLTVDLG HRSYPIVFAA DVRNNVRDQV AELTTAGRKV AVFTDEQVAS AQVGALEAMF
GSSPRLAFAP GESAKSLASF GRAMDFLAAQ KVDRRGVVFA FGGGVIGDLA GFIAASWLRG
IDFYQVPTTL LAMVDSSVGG KTGINIPAGK NLVGAFHQPR GVFIGTDFLR TLPAREFAAG
MAEVIKYGLL GDAALLELLE RAPLSFVSPE LAGVIRQCCA LKAAFVQADE RELAPEGGRA
LLNLGHTFGH AIEQVTGYGV YLHGEAVAIG MCAAARLSAK LGHLGGADVA RVDAVVAAHR
LPVKLRTPLV LMDLLAAMAR DKKVRAGMPR FVVLRKLGEA VTQDDVPAEL AAECFREVGA
S
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