| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4291 |
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| Symbol | |
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| ID | 6208246 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5570243 |
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| End bp | 5571031 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641693959 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001821164 |
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| Protein GI | 182416098 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0896711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCCC CTGATTATCT TCAGCAACTC TTCGGTCTGA GCGGCAAAGT CGCCGTCGTC
ATCGGCGGCA CCGGCGAATT GTGCGGCGCC ATGGCCGAAG GCCTGGCCGG CGCCGGCGCC
GAGGTCGTGA TCGTCGGCCG CAATGCCGAG AAGGCCAAGG CCCGGATCGA CAAGATCGCC
GCCGCCGGCG GCAAGGCGTG GTTCCACGCC GCCGAGGCCA CGAGCAAAGC CGAAGTGCAG
GGCCTCCTCG ATGCCGTGCT GAAAAAATCC GGCCAGGTCG ACGTGGTCGT CAACGGCGCC
GGCATCAACT CCGCCACGCC GTTCTTCGAC ATCAGCGAGG AGGAGTTCGA GCGCATTCTC
CGTGTCAACG TCAAGGGCGT GTTCCTCGGC TGCCAGGTGT TTGGCAAATA CCTCGTCGAG
CGCGGCCAGG GCGGCTCGAT CATCAACCTC GGCTCGATGT CCGGCGTCGT GCCGCTTTCC
CGCGTGTTCA CCTACTCCGC CTCCAAGGGC GCGGTGCACA ATCTCTCGCT CAACCTCGCG
CGCGAATGGG CGCCGCACCG CGTGCGCGTG AACGTCCTCG TCCCCGGTTT CTTTCCCGCC
GAGCAAAACC GCAAGGTGCT CACGCCCGAC CGCGTCACCG CGATCATGGG CCACACGCCC
GCCAAGCGCT TTGGCGAAGC GCGCGAGCTG ATCGGCGCCA CGCTGCTGCT CGCCTCCGAC
GCCGCCGGCT CGTTCATCAC CGGCGAAGAG CTGATCGTCG ACGGCGGCTA CCACGCGATG
ACGATCTGA
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| Protein sequence | MKSPDYLQQL FGLSGKVAVV IGGTGELCGA MAEGLAGAGA EVVIVGRNAE KAKARIDKIA
AAGGKAWFHA AEATSKAEVQ GLLDAVLKKS GQVDVVVNGA GINSATPFFD ISEEEFERIL
RVNVKGVFLG CQVFGKYLVE RGQGGSIINL GSMSGVVPLS RVFTYSASKG AVHNLSLNLA
REWAPHRVRV NVLVPGFFPA EQNRKVLTPD RVTAIMGHTP AKRFGEAREL IGATLLLASD
AAGSFITGEE LIVDGGYHAM TI
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