| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4285 |
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| Symbol | |
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| ID | 6208126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5557904 |
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| End bp | 5559535 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693953 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001821158 |
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| Protein GI | 182416092 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTCT TCCCCGCCGC ATTCATCGTC GTTTCCGGGC TCCTCGGCCC GTTGTTCGGC
GCGACCGTTC AGCCCTCCGC CGAGCCGGAA CCCATCGCGC CAATTCGCGC GCCGTTCCCG
ATGCCGCAAC TCGCCCGGCC GACCTTCCCC GCGCGCGTCG AGGACATTCG CGATCATGGC
GCCGTCCCCG GCGGCAAAAC GAAGAACACC GCCGCGTTTG CCCAGGCGAT CGCCGCCTGC
GCCGAAGCCG GCGGCGGCCG CGTGCTCGTC CCCGCGGGGC GCTGGCTGAC CGGCCCGATT
CACCTGCGCA GCAACATCGA ACTGCATCTC GCCCAGGACG CCGAAGTGAT TTTCAGCGAC
CGGTTCGAGG ATTACCTGCC GGTCGTGCTC GTCCGGGTTG GCGGCATCGA GCTCTACAAC
TACTCGCCGT TCATCTACGC GCGCGACTGC ACCAACGTCG CGATCACCGG CCCCGGCCGG
CTCAACGGCA ATTCGCAGCG CTGGTGGGCC TGGAAAACCA AGGAGACGAA GCGCATCTTC
AGGCTCGCCC CCGACGGCGT CCCGGTCGAG CAGCGGATCT TCGGCACGCC CGAGGCCGCC
ATCCGGCCGA ACTTCGTCGT GTTCTTCAAC TGCCGCAACG TGCTCATGGA GGGCTTCACC
ATCGGCGGCG GACCCAACTG GACGATCCAT CCCGTTTACT CGGAAAACAT CATCATCCGC
CGCGTCCACG TCCTCACCGA GGGGCCGAAC AACGACGGCA TCGACCCCGA TTCCTGCCGC
AACGTGCTCA TTGAACACTG CGTCTTCGAC ACCGGCGATG ACTGCGTCGT CCTCAAGTCC
GGTTACAACG AGGATGGCTG GCGCGTCGCC CGCCCGACCG AGAACGTCGT CATGCGCTGG
TGTTCGAGCG CGCGCGGCCA CGGTGGACTC GTCGTCGGCA GCGAGATGTC CGGCGACGTC
CGCAATGTCT ACATGCACGA CTGCGACTTC GCCGGCACCG ATCGCGCCGT CCGGATCAAA
TCGCGCCGCG GCCGCGGTGG CGTCGTGGAA AACATCTGGG CCGAAAATCT GCGCGTTCGC
GACATGCAGC AGGAGGTCGT CATTCTCAAC ATGGACTACG GCGCCGATCG CAACCAGGCG
TTCACCGAAA AACCGCCGCT GTTCCGCAAC ATTCACGTGC GTCGCGTCAC CGCCGACGGC
GCGCCCGCCG CCATCCGCAT CGCCGGACTC GCCGACTCGC CGATCGAGCA CGTCACCTTC
GAGGATCTGA CGATCCAGTC GACCCGCGGC GTCATCGCCC AGCATGTCCG CGGACTCACC
TTCGCGAATG TCGCGATCGG GCCGCGTATC GGCCCGGTGT TCGAGCTCAC CGACGCGCAG
GACGTGCTCG TCCGGACCCG TGGCACGGGC GTCCCGCCCG TGGCTACAGC CACCGACACG
CCTGCCAGTG CTCCGCGGAA TGCGTTCCTG CAGGTCGCGG GCGCCCGTTC GGACAACATC
CGAATCGAAA CCGCTGTCGC CGACGCGACT CCCGCCATTC AGCGCGCAGA CGACGTCGCC
CCCGACGCGG TCAGCATCGT TCCGTTGTCC GCCGACCCCG CCGTCGTCCC GGAGGCGTGG
CCGCAGTTTT AG
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| Protein sequence | MRFFPAAFIV VSGLLGPLFG ATVQPSAEPE PIAPIRAPFP MPQLARPTFP ARVEDIRDHG
AVPGGKTKNT AAFAQAIAAC AEAGGGRVLV PAGRWLTGPI HLRSNIELHL AQDAEVIFSD
RFEDYLPVVL VRVGGIELYN YSPFIYARDC TNVAITGPGR LNGNSQRWWA WKTKETKRIF
RLAPDGVPVE QRIFGTPEAA IRPNFVVFFN CRNVLMEGFT IGGGPNWTIH PVYSENIIIR
RVHVLTEGPN NDGIDPDSCR NVLIEHCVFD TGDDCVVLKS GYNEDGWRVA RPTENVVMRW
CSSARGHGGL VVGSEMSGDV RNVYMHDCDF AGTDRAVRIK SRRGRGGVVE NIWAENLRVR
DMQQEVVILN MDYGADRNQA FTEKPPLFRN IHVRRVTADG APAAIRIAGL ADSPIEHVTF
EDLTIQSTRG VIAQHVRGLT FANVAIGPRI GPVFELTDAQ DVLVRTRGTG VPPVATATDT
PASAPRNAFL QVAGARSDNI RIETAVADAT PAIQRADDVA PDAVSIVPLS ADPAVVPEAW
PQF
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